Protein–RNA interactions for Protein: O54804

Chka, Choline kinase alpha, mousemouse

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ChkaO54804 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC12.47□□□□□ -0.41
ChkaO54804 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
ChkaO54804 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
ChkaO54804 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC12.47□□□□□ -0.41
ChkaO54804 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
ChkaO54804 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
ChkaO54804 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
ChkaO54804 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
ChkaO54804 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
ChkaO54804 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
ChkaO54804 Gm13736-201ENSMUST00000119272 253 ntBASIC12.47□□□□□ -0.41
ChkaO54804 Gm13829-201ENSMUST00000119600 138 ntBASIC12.47□□□□□ -0.41
ChkaO54804 Gm14660-201ENSMUST00000119809 575 ntBASIC12.47□□□□□ -0.41
ChkaO54804 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC12.47□□□□□ -0.41
ChkaO54804 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC12.47□□□□□ -0.41
ChkaO54804 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC12.47□□□□□ -0.41
ChkaO54804 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC12.47□□□□□ -0.41
ChkaO54804 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC12.47□□□□□ -0.41
ChkaO54804 Gm25261-201ENSMUST00000157416 134 ntBASIC12.47□□□□□ -0.41
ChkaO54804 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
ChkaO54804 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
ChkaO54804 Gm37748-201ENSMUST00000194379 1140 ntBASIC12.47□□□□□ -0.41
ChkaO54804 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC12.47□□□□□ -0.41
ChkaO54804 Gm5904-201ENSMUST00000210286 865 ntBASIC12.47□□□□□ -0.41
ChkaO54804 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
ChkaO54804 Gm39404-201ENSMUST00000216350 313 ntBASIC12.47□□□□□ -0.41
ChkaO54804 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC12.47□□□□□ -0.41
ChkaO54804 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
ChkaO54804 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
ChkaO54804 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
ChkaO54804 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
ChkaO54804 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
ChkaO54804 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
ChkaO54804 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC12.47□□□□□ -0.41
ChkaO54804 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
ChkaO54804 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
ChkaO54804 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
ChkaO54804 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
ChkaO54804 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
ChkaO54804 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
ChkaO54804 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
ChkaO54804 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
ChkaO54804 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
ChkaO54804 Gm7553-201ENSMUST00000185805 1426 ntBASIC12.46□□□□□ -0.41
ChkaO54804 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC12.46□□□□□ -0.41
ChkaO54804 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
ChkaO54804 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
ChkaO54804 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
ChkaO54804 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC12.46□□□□□ -0.41
ChkaO54804 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
ChkaO54804 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
ChkaO54804 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
ChkaO54804 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
ChkaO54804 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC12.46□□□□□ -0.41
ChkaO54804 Gm4984-201ENSMUST00000115987 360 ntBASIC12.46□□□□□ -0.41
ChkaO54804 Gm12314-201ENSMUST00000118104 538 ntBASIC12.46□□□□□ -0.41
ChkaO54804 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC12.46□□□□□ -0.41
ChkaO54804 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
ChkaO54804 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
ChkaO54804 Gm2639-201ENSMUST00000156881 1297 ntBASIC12.46□□□□□ -0.41
ChkaO54804 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
ChkaO54804 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
ChkaO54804 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC12.46□□□□□ -0.41
ChkaO54804 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC12.46□□□□□ -0.41
ChkaO54804 Gm45925-201ENSMUST00000218882 744 ntBASIC12.46□□□□□ -0.41
ChkaO54804 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
ChkaO54804 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
ChkaO54804 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC12.46□□□□□ -0.41
ChkaO54804 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
ChkaO54804 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
ChkaO54804 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
ChkaO54804 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC12.46□□□□□ -0.42
ChkaO54804 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
ChkaO54804 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
ChkaO54804 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
ChkaO54804 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
ChkaO54804 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
ChkaO54804 Gm19692-201ENSMUST00000203856 2084 ntBASIC12.46□□□□□ -0.42
ChkaO54804 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
ChkaO54804 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC12.45□□□□□ -0.42
ChkaO54804 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
ChkaO54804 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
ChkaO54804 Arhgef3-204ENSMUST00000225949 3198 ntBASIC12.45□□□□□ -0.42
ChkaO54804 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
ChkaO54804 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
ChkaO54804 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
ChkaO54804 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
ChkaO54804 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
ChkaO54804 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
ChkaO54804 Gm13226-201ENSMUST00000117838 404 ntBASIC12.45□□□□□ -0.42
ChkaO54804 Gm11425-201ENSMUST00000119608 498 ntBASIC12.45□□□□□ -0.42
ChkaO54804 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
ChkaO54804 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC12.45□□□□□ -0.42
ChkaO54804 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC12.45□□□□□ -0.42
ChkaO54804 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC12.45□□□□□ -0.42
ChkaO54804 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
ChkaO54804 Gm18187-201ENSMUST00000196476 984 ntBASIC12.45□□□□□ -0.42
ChkaO54804 CT025678.1-201ENSMUST00000214795 2972 ntBASIC12.45□□□□□ -0.42
ChkaO54804 Gm45930-201ENSMUST00000221330 292 ntBASIC12.45□□□□□ -0.42
ChkaO54804 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC12.45□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 90.2 ms