Protein–RNA interactions for Protein: O35988

Sdc4, Syndecan-4, mousemouse

Known RBP Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc4O35988 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Sdc4O35988 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Sdc4O35988 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Sdc4O35988 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Sdc4O35988 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Sdc4O35988 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Sdc4O35988 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Sdc4O35988 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Sdc4O35988 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Sdc4O35988 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Sdc4O35988 Gm7857-201ENSMUST00000117957 358 ntBASIC12.71□□□□□ -0.37
Sdc4O35988 Gm4909-201ENSMUST00000118749 794 ntBASIC12.71□□□□□ -0.37
Sdc4O35988 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC12.71□□□□□ -0.37
Sdc4O35988 Mir5132-201ENSMUST00000175166 71 ntBASIC12.71□□□□□ -0.37
Sdc4O35988 Mir3102-201ENSMUST00000175555 104 ntBASIC12.71□□□□□ -0.37
Sdc4O35988 Gm29615-201ENSMUST00000185371 697 ntBASIC12.71□□□□□ -0.37
Sdc4O35988 Gm28224-201ENSMUST00000186078 697 ntBASIC12.71□□□□□ -0.37
Sdc4O35988 Gm29001-201ENSMUST00000186177 697 ntBASIC12.71□□□□□ -0.37
Sdc4O35988 Gm28292-201ENSMUST00000186593 697 ntBASIC12.71□□□□□ -0.37
Sdc4O35988 Gm28101-201ENSMUST00000187608 697 ntBASIC12.71□□□□□ -0.37
Sdc4O35988 Gm29076-201ENSMUST00000187689 697 ntBASIC12.71□□□□□ -0.37
Sdc4O35988 Gm28302-201ENSMUST00000187931 697 ntBASIC12.71□□□□□ -0.37
Sdc4O35988 Gm28646-201ENSMUST00000188220 697 ntBASIC12.71□□□□□ -0.37
Sdc4O35988 Gm28205-201ENSMUST00000189177 697 ntBASIC12.71□□□□□ -0.37
Sdc4O35988 Gm29032-201ENSMUST00000189797 697 ntBASIC12.71□□□□□ -0.37
Sdc4O35988 Gm28695-201ENSMUST00000190300 697 ntBASIC12.71□□□□□ -0.37
Sdc4O35988 Gm37448-201ENSMUST00000192795 697 ntBASIC12.71□□□□□ -0.37
Sdc4O35988 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Sdc4O35988 Gm19994-201ENSMUST00000217086 586 ntBASIC12.71□□□□□ -0.37
Sdc4O35988 Gm18730-201ENSMUST00000218038 343 ntBASIC12.71□□□□□ -0.37
Sdc4O35988 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC12.71□□□□□ -0.37
Sdc4O35988 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Sdc4O35988 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Sdc4O35988 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Sdc4O35988 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Sdc4O35988 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Sdc4O35988 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Sdc4O35988 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Sdc4O35988 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Sdc4O35988 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Sdc4O35988 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Sdc4O35988 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Sdc4O35988 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Sdc4O35988 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Sdc4O35988 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Sdc4O35988 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Sdc4O35988 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Sdc4O35988 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Sdc4O35988 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Sdc4O35988 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Sdc4O35988 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Sdc4O35988 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Sdc4O35988 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Sdc4O35988 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sdc4O35988 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sdc4O35988 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sdc4O35988 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sdc4O35988 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sdc4O35988 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sdc4O35988 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Sdc4O35988 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sdc4O35988 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sdc4O35988 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Sdc4O35988 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sdc4O35988 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Sdc4O35988 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC12.7□□□□□ -0.38
Sdc4O35988 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC12.7□□□□□ -0.38
Sdc4O35988 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sdc4O35988 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sdc4O35988 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Sdc4O35988 Gm11989-201ENSMUST00000117240 672 ntBASIC12.7□□□□□ -0.38
Sdc4O35988 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sdc4O35988 Gm11362-201ENSMUST00000118838 850 ntBASIC12.7□□□□□ -0.38
Sdc4O35988 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC12.7□□□□□ -0.38
Sdc4O35988 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC12.7□□□□□ -0.38
Sdc4O35988 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC12.7□□□□□ -0.38
Sdc4O35988 Gm24749-201ENSMUST00000157838 343 ntBASIC12.7□□□□□ -0.38
Sdc4O35988 Gm28450-201ENSMUST00000187349 638 ntBASIC12.7□□□□□ -0.38
Sdc4O35988 Ighv5-7-201ENSMUST00000192302 244 ntBASIC12.7□□□□□ -0.38
Sdc4O35988 AC153974.2-201ENSMUST00000218577 1025 ntBASIC12.7□□□□□ -0.38
Sdc4O35988 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Sdc4O35988 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Sdc4O35988 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Sdc4O35988 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sdc4O35988 AC123834.1-201ENSMUST00000225346 2043 ntBASIC12.7□□□□□ -0.38
Sdc4O35988 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sdc4O35988 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sdc4O35988 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sdc4O35988 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sdc4O35988 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Sdc4O35988 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sdc4O35988 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Sdc4O35988 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC12.7□□□□□ -0.38
Sdc4O35988 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sdc4O35988 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Sdc4O35988 Ntrk2-204ENSMUST00000224259 3049 ntBASIC12.7□□□□□ -0.38
Sdc4O35988 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sdc4O35988 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sdc4O35988 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sdc4O35988 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms