Protein–RNA interactions for Protein: O35137

Alx4, Homeobox protein aristaless-like 4, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx4O35137 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC11□□□□□ -0.65
Alx4O35137 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Alx4O35137 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Alx4O35137 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Alx4O35137 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Alx4O35137 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC11□□□□□ -0.65
Alx4O35137 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC11□□□□□ -0.65
Alx4O35137 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Alx4O35137 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC11□□□□□ -0.65
Alx4O35137 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Alx4O35137 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC11□□□□□ -0.65
Alx4O35137 Gm11597-201ENSMUST00000121423 964 ntBASIC11□□□□□ -0.65
Alx4O35137 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Alx4O35137 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC11□□□□□ -0.65
Alx4O35137 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC11□□□□□ -0.65
Alx4O35137 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC11□□□□□ -0.65
Alx4O35137 Gm18018-201ENSMUST00000198273 408 ntBASIC11□□□□□ -0.65
Alx4O35137 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC11□□□□□ -0.65
Alx4O35137 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Alx4O35137 Gm6007-201ENSMUST00000208170 823 ntBASIC11□□□□□ -0.65
Alx4O35137 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC11□□□□□ -0.65
Alx4O35137 AC155237.1-201ENSMUST00000226196 1279 ntBASIC11□□□□□ -0.65
Alx4O35137 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Alx4O35137 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Alx4O35137 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC11□□□□□ -0.65
Alx4O35137 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Alx4O35137 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC11□□□□□ -0.65
Alx4O35137 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC11□□□□□ -0.65
Alx4O35137 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC11□□□□□ -0.65
Alx4O35137 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC11□□□□□ -0.65
Alx4O35137 Atic-201ENSMUST00000027384 2845 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Alx4O35137 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC11□□□□□ -0.65
Alx4O35137 Aldh3a1-202ENSMUST00000108716 1721 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Alx4O35137 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC11□□□□□ -0.65
Alx4O35137 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Alx4O35137 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Alx4O35137 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Alx4O35137 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Alx4O35137 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC11□□□□□ -0.65
Alx4O35137 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Alx4O35137 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Alx4O35137 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC11□□□□□ -0.65
Alx4O35137 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Alx4O35137 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Alx4O35137 Srp54b-202ENSMUST00000218879 3642 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Alx4O35137 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC10.99□□□□□ -0.65
Alx4O35137 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Alx4O35137 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Alx4O35137 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Alx4O35137 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Alx4O35137 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Alx4O35137 Gm8228-201ENSMUST00000189949 2192 ntBASIC10.99□□□□□ -0.65
Alx4O35137 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Alx4O35137 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Alx4O35137 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Alx4O35137 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Alx4O35137 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Alx4O35137 Gm45428-201ENSMUST00000209619 1789 ntBASIC10.99□□□□□ -0.65
Alx4O35137 Mir692-1-201ENSMUST00000102263 109 ntBASIC10.99□□□□□ -0.65
Alx4O35137 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
Alx4O35137 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Alx4O35137 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Alx4O35137 Gm12036-201ENSMUST00000120008 530 ntBASIC10.99□□□□□ -0.65
Alx4O35137 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Alx4O35137 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Alx4O35137 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC10.99□□□□□ -0.65
Alx4O35137 Gm24196-201ENSMUST00000179161 110 ntBASIC10.99□□□□□ -0.65
Alx4O35137 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Alx4O35137 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC10.99□□□□□ -0.65
Alx4O35137 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC10.99□□□□□ -0.65
Alx4O35137 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Alx4O35137 Gm45930-201ENSMUST00000221330 292 ntBASIC10.99□□□□□ -0.65
Alx4O35137 AC069562.3-201ENSMUST00000225387 587 ntBASIC10.99□□□□□ -0.65
Alx4O35137 AC159006.1-201ENSMUST00000226396 258 ntBASIC10.99□□□□□ -0.65
Alx4O35137 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Alx4O35137 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Alx4O35137 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
Alx4O35137 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
Alx4O35137 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
Alx4O35137 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Alx4O35137 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Alx4O35137 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Alx4O35137 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC10.99□□□□□ -0.65
Alx4O35137 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Alx4O35137 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Alx4O35137 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Alx4O35137 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Alx4O35137 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Alx4O35137 Gm43622-201ENSMUST00000200140 2019 ntBASIC10.99□□□□□ -0.65
Alx4O35137 Gm10110-202ENSMUST00000228705 3220 ntBASIC10.99□□□□□ -0.65
Alx4O35137 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Alx4O35137 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Alx4O35137 AC124433.1-202ENSMUST00000224762 1535 ntBASIC10.99□□□□□ -0.65
Alx4O35137 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Alx4O35137 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Alx4O35137 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Alx4O35137 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Alx4O35137 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Alx4O35137 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Alx4O35137 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms