Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NpcdF8VQB8 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NpcdF8VQB8 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
NpcdF8VQB8 Gm7278-201ENSMUST00000119836 1401 ntBASIC14.86□□□□□ -0.03
NpcdF8VQB8 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NpcdF8VQB8 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC14.86□□□□□ -0.03
NpcdF8VQB8 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC14.86□□□□□ -0.03
NpcdF8VQB8 Gm13182-201ENSMUST00000122241 312 ntBASIC14.86□□□□□ -0.03
NpcdF8VQB8 Gm22144-201ENSMUST00000157402 102 ntBASIC14.86□□□□□ -0.03
NpcdF8VQB8 Rwdd2a-202ENSMUST00000179212 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NpcdF8VQB8 1700020A23Rik-203ENSMUST00000189961 541 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
NpcdF8VQB8 Gm42937-201ENSMUST00000197360 752 ntBASIC14.86□□□□□ -0.03
NpcdF8VQB8 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
NpcdF8VQB8 AC129219.2-201ENSMUST00000224324 701 ntBASIC14.86□□□□□ -0.03
NpcdF8VQB8 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NpcdF8VQB8 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NpcdF8VQB8 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
NpcdF8VQB8 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
NpcdF8VQB8 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
NpcdF8VQB8 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
NpcdF8VQB8 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
NpcdF8VQB8 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC14.85□□□□□ -0.03
NpcdF8VQB8 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
NpcdF8VQB8 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC14.85□□□□□ -0.03
NpcdF8VQB8 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NpcdF8VQB8 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
NpcdF8VQB8 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
NpcdF8VQB8 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NpcdF8VQB8 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
NpcdF8VQB8 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
NpcdF8VQB8 Gm4782-201ENSMUST00000168705 2046 ntBASIC14.85□□□□□ -0.03
NpcdF8VQB8 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
NpcdF8VQB8 Gm3765-201ENSMUST00000130985 1447 ntBASIC14.85□□□□□ -0.03
NpcdF8VQB8 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC14.85□□□□□ -0.03
NpcdF8VQB8 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
NpcdF8VQB8 Gm11470-201ENSMUST00000118868 1475 ntBASIC14.85□□□□□ -0.03
NpcdF8VQB8 Gm13668-201ENSMUST00000119237 1001 ntBASIC14.85□□□□□ -0.03
NpcdF8VQB8 Mrps17-204ENSMUST00000119604 1208 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NpcdF8VQB8 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC14.85□□□□□ -0.03
NpcdF8VQB8 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
NpcdF8VQB8 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
NpcdF8VQB8 Gm29292-201ENSMUST00000186169 766 ntTSL 3 BASIC14.85□□□□□ -0.03
NpcdF8VQB8 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
NpcdF8VQB8 Gm10288-201ENSMUST00000084614 537 ntBASIC14.85□□□□□ -0.03
NpcdF8VQB8 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NpcdF8VQB8 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
NpcdF8VQB8 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NpcdF8VQB8 AC117194.1-201ENSMUST00000224847 3002 ntBASIC14.85□□□□□ -0.03
NpcdF8VQB8 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
NpcdF8VQB8 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NpcdF8VQB8 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
NpcdF8VQB8 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NpcdF8VQB8 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NpcdF8VQB8 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
NpcdF8VQB8 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
NpcdF8VQB8 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
NpcdF8VQB8 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
NpcdF8VQB8 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
NpcdF8VQB8 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
NpcdF8VQB8 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
NpcdF8VQB8 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC14.84□□□□□ -0.03
NpcdF8VQB8 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
NpcdF8VQB8 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
NpcdF8VQB8 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
NpcdF8VQB8 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
NpcdF8VQB8 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC14.84□□□□□ -0.03
NpcdF8VQB8 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
NpcdF8VQB8 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
NpcdF8VQB8 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
NpcdF8VQB8 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
NpcdF8VQB8 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
NpcdF8VQB8 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
NpcdF8VQB8 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
NpcdF8VQB8 Gm12969-201ENSMUST00000120199 1004 ntBASIC14.84□□□□□ -0.03
NpcdF8VQB8 Gm1848-201ENSMUST00000120711 789 ntBASIC14.84□□□□□ -0.03
NpcdF8VQB8 Gm8199-201ENSMUST00000121323 823 ntBASIC14.84□□□□□ -0.03
NpcdF8VQB8 Gm11980-201ENSMUST00000121445 986 ntBASIC14.84□□□□□ -0.03
NpcdF8VQB8 Gm8737-201ENSMUST00000122208 642 ntBASIC14.84□□□□□ -0.03
NpcdF8VQB8 Spata3-207ENSMUST00000135440 732 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
NpcdF8VQB8 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
NpcdF8VQB8 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
NpcdF8VQB8 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC14.84□□□□□ -0.03
NpcdF8VQB8 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
NpcdF8VQB8 Gm8343-201ENSMUST00000182705 994 ntBASIC14.84□□□□□ -0.03
NpcdF8VQB8 Gm29083-201ENSMUST00000189205 733 ntTSL 3 BASIC14.84□□□□□ -0.03
NpcdF8VQB8 Gm37229-201ENSMUST00000191643 732 ntTSL 3 BASIC14.84□□□□□ -0.03
NpcdF8VQB8 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
NpcdF8VQB8 Gm45717-201ENSMUST00000211129 495 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
NpcdF8VQB8 AC166341.2-201ENSMUST00000220571 120 ntBASIC14.84□□□□□ -0.03
NpcdF8VQB8 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
NpcdF8VQB8 Gbgt1-201ENSMUST00000028172 1084 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
NpcdF8VQB8 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
NpcdF8VQB8 Spata3-201ENSMUST00000052854 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
NpcdF8VQB8 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
NpcdF8VQB8 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC14.84□□□□□ -0.03
NpcdF8VQB8 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
NpcdF8VQB8 Rgs6-207ENSMUST00000186323 1308 ntTSL 5 BASIC14.84□□□□□ -0.03
NpcdF8VQB8 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
NpcdF8VQB8 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
NpcdF8VQB8 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 59.8 ms