Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdh9F8VPK8 Cog3-203ENSMUST00000227473 4197 ntBASIC12.63□□□□□ -0.39
Pcdh9F8VPK8 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdh9F8VPK8 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Pcdh9F8VPK8 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdh9F8VPK8 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdh9F8VPK8 Gm9431-201ENSMUST00000119765 1051 ntBASIC12.63□□□□□ -0.39
Pcdh9F8VPK8 Gm11591-201ENSMUST00000120063 702 ntBASIC12.63□□□□□ -0.39
Pcdh9F8VPK8 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC12.63□□□□□ -0.39
Pcdh9F8VPK8 Gm8738-201ENSMUST00000172606 329 ntBASIC12.63□□□□□ -0.39
Pcdh9F8VPK8 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdh9F8VPK8 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdh9F8VPK8 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC12.63□□□□□ -0.39
Pcdh9F8VPK8 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC12.63□□□□□ -0.39
Pcdh9F8VPK8 Gm4935-201ENSMUST00000221316 1198 ntBASIC12.63□□□□□ -0.39
Pcdh9F8VPK8 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdh9F8VPK8 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdh9F8VPK8 n-R5s195-201ENSMUST00000082891 119 ntBASIC12.63□□□□□ -0.39
Pcdh9F8VPK8 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdh9F8VPK8 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Pcdh9F8VPK8 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdh9F8VPK8 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdh9F8VPK8 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdh9F8VPK8 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdh9F8VPK8 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdh9F8VPK8 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdh9F8VPK8 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdh9F8VPK8 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdh9F8VPK8 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdh9F8VPK8 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdh9F8VPK8 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Pcdh9F8VPK8 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdh9F8VPK8 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdh9F8VPK8 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdh9F8VPK8 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdh9F8VPK8 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdh9F8VPK8 Gm7537-201ENSMUST00000221660 1414 ntBASIC12.62□□□□□ -0.39
Pcdh9F8VPK8 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC12.62□□□□□ -0.39
Pcdh9F8VPK8 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdh9F8VPK8 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdh9F8VPK8 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Pcdh9F8VPK8 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdh9F8VPK8 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdh9F8VPK8 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdh9F8VPK8 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Pcdh9F8VPK8 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdh9F8VPK8 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdh9F8VPK8 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Pcdh9F8VPK8 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Pcdh9F8VPK8 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdh9F8VPK8 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdh9F8VPK8 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdh9F8VPK8 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC12.62□□□□□ -0.39
Pcdh9F8VPK8 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Pcdh9F8VPK8 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdh9F8VPK8 Gm13342-201ENSMUST00000121055 207 ntBASIC12.62□□□□□ -0.39
Pcdh9F8VPK8 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdh9F8VPK8 Mir1982-201ENSMUST00000157368 74 ntBASIC12.62□□□□□ -0.39
Pcdh9F8VPK8 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC12.62□□□□□ -0.39
Pcdh9F8VPK8 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC12.62□□□□□ -0.39
Pcdh9F8VPK8 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC12.62□□□□□ -0.39
Pcdh9F8VPK8 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdh9F8VPK8 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC12.62□□□□□ -0.39
Pcdh9F8VPK8 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC12.62□□□□□ -0.39
Pcdh9F8VPK8 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC12.62□□□□□ -0.39
Pcdh9F8VPK8 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdh9F8VPK8 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdh9F8VPK8 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Pcdh9F8VPK8 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Pcdh9F8VPK8 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdh9F8VPK8 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdh9F8VPK8 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdh9F8VPK8 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdh9F8VPK8 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdh9F8VPK8 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdh9F8VPK8 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdh9F8VPK8 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdh9F8VPK8 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdh9F8VPK8 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdh9F8VPK8 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Pcdh9F8VPK8 Gm43579-201ENSMUST00000202387 1307 ntBASIC12.62□□□□□ -0.39
Pcdh9F8VPK8 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC12.62□□□□□ -0.39
Pcdh9F8VPK8 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Pcdh9F8VPK8 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC12.62□□□□□ -0.39
Pcdh9F8VPK8 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdh9F8VPK8 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Pcdh9F8VPK8 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Pcdh9F8VPK8 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdh9F8VPK8 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdh9F8VPK8 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdh9F8VPK8 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdh9F8VPK8 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdh9F8VPK8 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdh9F8VPK8 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdh9F8VPK8 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdh9F8VPK8 Gm12846-201ENSMUST00000120431 1373 ntBASIC12.61□□□□□ -0.39
Pcdh9F8VPK8 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Pcdh9F8VPK8 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdh9F8VPK8 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC12.61□□□□□ -0.39
Pcdh9F8VPK8 Gm3890-201ENSMUST00000182416 207 ntBASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms