Protein–RNA interactions for Protein: E9PXC0

Srp54b, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54bE9PXC0 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Srp54bE9PXC0 AC154252.2-201ENSMUST00000223593 767 ntBASIC12.2□□□□□ -0.46
Srp54bE9PXC0 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Srp54bE9PXC0 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Srp54bE9PXC0 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Srp54bE9PXC0 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Srp54bE9PXC0 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC12.2□□□□□ -0.46
Srp54bE9PXC0 Gm5385-201ENSMUST00000118988 1559 ntBASIC12.2□□□□□ -0.46
Srp54bE9PXC0 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC12.2□□□□□ -0.46
Srp54bE9PXC0 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Srp54bE9PXC0 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Srp54bE9PXC0 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Srp54bE9PXC0 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
Srp54bE9PXC0 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC12.2□□□□□ -0.46
Srp54bE9PXC0 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Srp54bE9PXC0 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Srp54bE9PXC0 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Srp54bE9PXC0 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Srp54bE9PXC0 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC12.2□□□□□ -0.46
Srp54bE9PXC0 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC12.2□□□□□ -0.46
Srp54bE9PXC0 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Srp54bE9PXC0 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC12.2□□□□□ -0.46
Srp54bE9PXC0 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Srp54bE9PXC0 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Srp54bE9PXC0 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Srp54bE9PXC0 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Srp54bE9PXC0 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Srp54bE9PXC0 Gm45011-201ENSMUST00000207620 2297 ntBASIC12.2□□□□□ -0.46
Srp54bE9PXC0 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Srp54bE9PXC0 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Srp54bE9PXC0 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Srp54bE9PXC0 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Srp54bE9PXC0 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Srp54bE9PXC0 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Srp54bE9PXC0 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Srp54bE9PXC0 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Srp54bE9PXC0 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Srp54bE9PXC0 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Srp54bE9PXC0 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Srp54bE9PXC0 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Srp54bE9PXC0 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Srp54bE9PXC0 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Srp54bE9PXC0 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Srp54bE9PXC0 Gm24934-201ENSMUST00000103764 111 ntBASIC12.19□□□□□ -0.46
Srp54bE9PXC0 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC12.19□□□□□ -0.46
Srp54bE9PXC0 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC12.19□□□□□ -0.46
Srp54bE9PXC0 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC12.19□□□□□ -0.46
Srp54bE9PXC0 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC12.19□□□□□ -0.46
Srp54bE9PXC0 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC12.19□□□□□ -0.46
Srp54bE9PXC0 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Srp54bE9PXC0 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Srp54bE9PXC0 Gm37986-201ENSMUST00000193285 383 ntBASIC12.19□□□□□ -0.46
Srp54bE9PXC0 Gm43378-201ENSMUST00000199336 582 ntBASIC12.19□□□□□ -0.46
Srp54bE9PXC0 Gm42997-202ENSMUST00000200321 985 ntBASIC12.19□□□□□ -0.46
Srp54bE9PXC0 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Srp54bE9PXC0 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC12.19□□□□□ -0.46
Srp54bE9PXC0 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC12.19□□□□□ -0.46
Srp54bE9PXC0 AC159205.5-202ENSMUST00000224849 386 ntBASIC12.19□□□□□ -0.46
Srp54bE9PXC0 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Srp54bE9PXC0 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Srp54bE9PXC0 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Srp54bE9PXC0 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Srp54bE9PXC0 Gm42840-201ENSMUST00000200303 2251 ntBASIC12.19□□□□□ -0.46
Srp54bE9PXC0 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Srp54bE9PXC0 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Srp54bE9PXC0 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Srp54bE9PXC0 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Srp54bE9PXC0 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Srp54bE9PXC0 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Srp54bE9PXC0 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Srp54bE9PXC0 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Srp54bE9PXC0 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC12.19□□□□□ -0.46
Srp54bE9PXC0 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Srp54bE9PXC0 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Srp54bE9PXC0 Gm43721-201ENSMUST00000199677 2313 ntBASIC12.19□□□□□ -0.46
Srp54bE9PXC0 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Srp54bE9PXC0 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Srp54bE9PXC0 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Srp54bE9PXC0 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC12.18□□□□□ -0.46
Srp54bE9PXC0 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Srp54bE9PXC0 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC12.18□□□□□ -0.46
Srp54bE9PXC0 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC12.18□□□□□ -0.46
Srp54bE9PXC0 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Srp54bE9PXC0 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Srp54bE9PXC0 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Srp54bE9PXC0 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Srp54bE9PXC0 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Srp54bE9PXC0 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Srp54bE9PXC0 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC12.18□□□□□ -0.46
Srp54bE9PXC0 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Srp54bE9PXC0 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC12.18□□□□□ -0.46
Srp54bE9PXC0 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Srp54bE9PXC0 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC12.18□□□□□ -0.46
Srp54bE9PXC0 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Srp54bE9PXC0 Gm11989-201ENSMUST00000117240 672 ntBASIC12.18□□□□□ -0.46
Srp54bE9PXC0 Gm11362-201ENSMUST00000118838 850 ntBASIC12.18□□□□□ -0.46
Srp54bE9PXC0 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Srp54bE9PXC0 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Srp54bE9PXC0 AY036118-201ENSMUST00000200021 923 ntBASIC12.18□□□□□ -0.46
Srp54bE9PXC0 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms