Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 4933405E24Rik-201ENSMUST00000131019 1078 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Gm28043E0CXC2 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Gm28043E0CXC2 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Gm28043E0CXC2 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC12.4□□□□□ -0.42
Gm28043E0CXC2 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
Gm28043E0CXC2 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Gm28043E0CXC2 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Gm28043E0CXC2 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Gm28043E0CXC2 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Gm28043E0CXC2 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC12.4□□□□□ -0.42
Gm28043E0CXC2 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Gm28043E0CXC2 Gm44094-201ENSMUST00000204703 2030 ntBASIC12.4□□□□□ -0.42
Gm28043E0CXC2 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Gm28043E0CXC2 Rimbp2-204ENSMUST00000198941 6446 ntAPPRIS P3 TSL 2 BASIC12.4□□□□□ -0.42
Gm28043E0CXC2 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Gm28043E0CXC2 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC12.4□□□□□ -0.43
Gm28043E0CXC2 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Gm28043E0CXC2 Myom3-201ENSMUST00000105854 5575 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.43
Gm28043E0CXC2 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Gm28043E0CXC2 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Gm28043E0CXC2 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Gm28043E0CXC2 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Gm28043E0CXC2 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Gm28043E0CXC2 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Gm28043E0CXC2 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Gm28043E0CXC2 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Gm28043E0CXC2 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Gm28043E0CXC2 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Gm28043E0CXC2 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
Gm28043E0CXC2 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Gm28043E0CXC2 Gm10652-201ENSMUST00000199790 2622 ntBASIC12.39□□□□□ -0.43
Gm28043E0CXC2 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC12.39□□□□□ -0.43
Gm28043E0CXC2 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Gm28043E0CXC2 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Gm28043E0CXC2 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Gm28043E0CXC2 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC12.39□□□□□ -0.43
Gm28043E0CXC2 Gm16177-201ENSMUST00000120728 718 ntBASIC12.39□□□□□ -0.43
Gm28043E0CXC2 Gm12291-201ENSMUST00000121627 311 ntBASIC12.39□□□□□ -0.43
Gm28043E0CXC2 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Gm28043E0CXC2 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC12.39□□□□□ -0.43
Gm28043E0CXC2 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC12.39□□□□□ -0.43
Gm28043E0CXC2 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Gm28043E0CXC2 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Gm28043E0CXC2 Gm37042-201ENSMUST00000193816 581 ntBASIC12.39□□□□□ -0.43
Gm28043E0CXC2 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC12.39□□□□□ -0.43
Gm28043E0CXC2 Gm6266-201ENSMUST00000203844 806 ntBASIC12.39□□□□□ -0.43
Gm28043E0CXC2 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC12.39□□□□□ -0.43
Gm28043E0CXC2 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Gm28043E0CXC2 Cdk7-205ENSMUST00000225990 1159 ntBASIC12.39□□□□□ -0.43
Gm28043E0CXC2 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Gm28043E0CXC2 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Gm28043E0CXC2 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Gm28043E0CXC2 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Gm28043E0CXC2 Gm44086-201ENSMUST00000203251 2349 ntBASIC12.39□□□□□ -0.43
Gm28043E0CXC2 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Gm28043E0CXC2 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Gm28043E0CXC2 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Gm28043E0CXC2 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Gm28043E0CXC2 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Gm28043E0CXC2 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Gm28043E0CXC2 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Gm28043E0CXC2 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Gm28043E0CXC2 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC12.39□□□□□ -0.43
Gm28043E0CXC2 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC12.39□□□□□ -0.43
Gm28043E0CXC2 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Gm28043E0CXC2 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Gm28043E0CXC2 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Gm28043E0CXC2 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC12.38□□□□□ -0.43
Gm28043E0CXC2 Rassf4-201ENSMUST00000035842 6460 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Gm28043E0CXC2 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Gm28043E0CXC2 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC12.38□□□□□ -0.43
Gm28043E0CXC2 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC12.38□□□□□ -0.43
Gm28043E0CXC2 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC12.38□□□□□ -0.43
Gm28043E0CXC2 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC12.38□□□□□ -0.43
Gm28043E0CXC2 Gm26185-201ENSMUST00000157692 266 ntBASIC12.38□□□□□ -0.43
Gm28043E0CXC2 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Gm28043E0CXC2 Gm7029-201ENSMUST00000173226 450 ntBASIC12.38□□□□□ -0.43
Gm28043E0CXC2 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Gm28043E0CXC2 Gm43818-201ENSMUST00000200605 466 ntBASIC12.38□□□□□ -0.43
Gm28043E0CXC2 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC12.38□□□□□ -0.43
Gm28043E0CXC2 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC12.38□□□□□ -0.43
Gm28043E0CXC2 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Gm28043E0CXC2 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Gm28043E0CXC2 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Gm28043E0CXC2 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Gm28043E0CXC2 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Gm28043E0CXC2 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Gm28043E0CXC2 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Gm28043E0CXC2 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Gm28043E0CXC2 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Gm28043E0CXC2 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Gm28043E0CXC2 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC12.38□□□□□ -0.43
Gm28043E0CXC2 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Gm28043E0CXC2 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Gm28043E0CXC2 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC12.38□□□□□ -0.43
Gm28043E0CXC2 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Gm28043E0CXC2 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Gm28043E0CXC2 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Gm28043E0CXC2 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gm28043E0CXC2 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 72.3 ms