Protein–RNA interactions for Protein: B1AYL1

Scn7a, Sodium channel protein, mousemouse

Predictions only

Length 1,681 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn7aB1AYL1 Rbmx2-ps-201ENSMUST00000119377 930 ntBASIC15.54■□□□□ 0.08
Scn7aB1AYL1 Gm4879-201ENSMUST00000122190 1272 ntBASIC15.54■□□□□ 0.08
Scn7aB1AYL1 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC15.54■□□□□ 0.08
Scn7aB1AYL1 4930506C21Rik-203ENSMUST00000130639 909 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Scn7aB1AYL1 Mir6407-201ENSMUST00000184510 101 ntBASIC15.54■□□□□ 0.08
Scn7aB1AYL1 2610027F03Rik-202ENSMUST00000186982 603 ntTSL 5 BASIC15.54■□□□□ 0.08
Scn7aB1AYL1 Gm8531-201ENSMUST00000188319 893 ntBASIC15.54■□□□□ 0.08
Scn7aB1AYL1 Gm35625-201ENSMUST00000210416 316 ntTSL 3 BASIC15.54■□□□□ 0.08
Scn7aB1AYL1 CT025551.1-201ENSMUST00000223996 692 ntBASIC15.54■□□□□ 0.08
Scn7aB1AYL1 Scg5-201ENSMUST00000024005 1208 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Scn7aB1AYL1 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Scn7aB1AYL1 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Scn7aB1AYL1 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Scn7aB1AYL1 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Scn7aB1AYL1 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
Scn7aB1AYL1 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Scn7aB1AYL1 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Scn7aB1AYL1 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Scn7aB1AYL1 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Scn7aB1AYL1 Gm3793-201ENSMUST00000204973 672 ntBASIC15.53■□□□□ 0.08
Scn7aB1AYL1 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Scn7aB1AYL1 AC138329.2-201ENSMUST00000225579 1842 ntBASIC15.53■□□□□ 0.08
Scn7aB1AYL1 AC164437.3-201ENSMUST00000228323 347 ntBASIC15.53■□□□□ 0.08
Scn7aB1AYL1 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Scn7aB1AYL1 Fkbpl-201ENSMUST00000036720 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Scn7aB1AYL1 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Scn7aB1AYL1 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Scn7aB1AYL1 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Scn7aB1AYL1 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Scn7aB1AYL1 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Scn7aB1AYL1 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Scn7aB1AYL1 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Scn7aB1AYL1 Gm6509-201ENSMUST00000098286 1218 ntTSL 5 BASIC15.53■□□□□ 0.08
Scn7aB1AYL1 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Scn7aB1AYL1 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Scn7aB1AYL1 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Scn7aB1AYL1 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Scn7aB1AYL1 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Scn7aB1AYL1 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Scn7aB1AYL1 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Scn7aB1AYL1 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Scn7aB1AYL1 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Scn7aB1AYL1 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Scn7aB1AYL1 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Scn7aB1AYL1 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Scn7aB1AYL1 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Scn7aB1AYL1 Nrxn1-215ENSMUST00000173917 1439 ntTSL 2 BASIC15.52■□□□□ 0.08
Scn7aB1AYL1 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Scn7aB1AYL1 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC15.52■□□□□ 0.08
Scn7aB1AYL1 Cetn2-203ENSMUST00000114551 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Scn7aB1AYL1 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Scn7aB1AYL1 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Scn7aB1AYL1 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Scn7aB1AYL1 Gm7593-201ENSMUST00000187246 644 ntBASIC15.52■□□□□ 0.08
Scn7aB1AYL1 Gm29410-201ENSMUST00000188383 694 ntBASIC15.52■□□□□ 0.08
Scn7aB1AYL1 Gm43552-201ENSMUST00000196121 365 ntAPPRIS P1 TSL 3 BASIC15.52■□□□□ 0.08
Scn7aB1AYL1 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC15.52■□□□□ 0.08
Scn7aB1AYL1 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC15.52■□□□□ 0.08
Scn7aB1AYL1 Prrxl1-205ENSMUST00000228878 723 ntBASIC15.52■□□□□ 0.08
Scn7aB1AYL1 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Scn7aB1AYL1 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Scn7aB1AYL1 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Scn7aB1AYL1 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
Scn7aB1AYL1 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
Scn7aB1AYL1 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Scn7aB1AYL1 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Scn7aB1AYL1 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Scn7aB1AYL1 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Scn7aB1AYL1 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Scn7aB1AYL1 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC15.51■□□□□ 0.07
Scn7aB1AYL1 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Scn7aB1AYL1 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Scn7aB1AYL1 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Scn7aB1AYL1 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Scn7aB1AYL1 Gm16397-201ENSMUST00000122201 494 ntBASIC15.51■□□□□ 0.07
Scn7aB1AYL1 Sox5os3-201ENSMUST00000139351 906 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Scn7aB1AYL1 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Scn7aB1AYL1 Snhg8-201ENSMUST00000196466 448 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Scn7aB1AYL1 CT010506.1-201ENSMUST00000223673 349 ntBASIC15.51■□□□□ 0.07
Scn7aB1AYL1 Ccl21a-201ENSMUST00000095114 870 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Scn7aB1AYL1 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Scn7aB1AYL1 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Scn7aB1AYL1 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC15.51■□□□□ 0.07
Scn7aB1AYL1 Otx2-202ENSMUST00000119070 1708 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Scn7aB1AYL1 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Scn7aB1AYL1 Acot6-202ENSMUST00000222921 3622 ntBASIC15.51■□□□□ 0.07
Scn7aB1AYL1 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Scn7aB1AYL1 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Scn7aB1AYL1 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Scn7aB1AYL1 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Scn7aB1AYL1 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Scn7aB1AYL1 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Scn7aB1AYL1 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Scn7aB1AYL1 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Scn7aB1AYL1 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC15.51■□□□□ 0.07
Scn7aB1AYL1 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Scn7aB1AYL1 Trmt10b-202ENSMUST00000107800 983 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Scn7aB1AYL1 0610010K14Rik-206ENSMUST00000108576 576 ntAPPRIS ALT1 TSL 2 BASIC15.51■□□□□ 0.07
Scn7aB1AYL1 Rbm3-205ENSMUST00000115619 969 ntAPPRIS ALT1 TSL 3 BASIC15.51■□□□□ 0.07
Scn7aB1AYL1 Gm23218-201ENSMUST00000158124 276 ntBASIC15.51■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms