Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Gm20400-201ENSMUST00000173695 665 ntTSL 3 BASIC12.43□□□□□ -0.42
Col4a6B1AVK5 Gm19015-201ENSMUST00000184002 1189 ntBASIC12.43□□□□□ -0.42
Col4a6B1AVK5 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Col4a6B1AVK5 Gm19640-201ENSMUST00000214849 464 ntBASIC12.43□□□□□ -0.42
Col4a6B1AVK5 Gm4978-201ENSMUST00000071565 801 ntBASIC12.43□□□□□ -0.42
Col4a6B1AVK5 Gm16380-201ENSMUST00000077997 478 ntBASIC12.43□□□□□ -0.42
Col4a6B1AVK5 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Col4a6B1AVK5 Clec4a3-201ENSMUST00000088468 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col4a6B1AVK5 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col4a6B1AVK5 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC12.43□□□□□ -0.42
Col4a6B1AVK5 Gm18983-201ENSMUST00000222884 2729 ntBASIC12.43□□□□□ -0.42
Col4a6B1AVK5 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Col4a6B1AVK5 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col4a6B1AVK5 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col4a6B1AVK5 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col4a6B1AVK5 Gm44152-201ENSMUST00000205007 1691 ntBASIC12.43□□□□□ -0.42
Col4a6B1AVK5 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col4a6B1AVK5 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col4a6B1AVK5 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Col4a6B1AVK5 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC12.43□□□□□ -0.42
Col4a6B1AVK5 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col4a6B1AVK5 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Col4a6B1AVK5 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Col4a6B1AVK5 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col4a6B1AVK5 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col4a6B1AVK5 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Col4a6B1AVK5 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col4a6B1AVK5 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col4a6B1AVK5 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Col4a6B1AVK5 Nppa-201ENSMUST00000103230 865 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col4a6B1AVK5 Ralyl-202ENSMUST00000108373 267 ntTSL 5 BASIC12.42□□□□□ -0.42
Col4a6B1AVK5 Srd5a3-202ENSMUST00000113506 1241 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Col4a6B1AVK5 Gm7541-201ENSMUST00000118361 535 ntBASIC12.42□□□□□ -0.42
Col4a6B1AVK5 Rhox3d-ps-201ENSMUST00000119181 825 ntBASIC12.42□□□□□ -0.42
Col4a6B1AVK5 Gm15374-201ENSMUST00000119313 844 ntBASIC12.42□□□□□ -0.42
Col4a6B1AVK5 Gm11980-201ENSMUST00000121445 986 ntBASIC12.42□□□□□ -0.42
Col4a6B1AVK5 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC12.42□□□□□ -0.42
Col4a6B1AVK5 Gm21972-201ENSMUST00000135197 776 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.42
Col4a6B1AVK5 Rnf181-212ENSMUST00000154098 969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col4a6B1AVK5 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Col4a6B1AVK5 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC12.42□□□□□ -0.42
Col4a6B1AVK5 Cabcoco1-201ENSMUST00000020103 1262 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col4a6B1AVK5 Cdipt-204ENSMUST00000206346 806 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Col4a6B1AVK5 Gm5780-201ENSMUST00000217774 1834 ntBASIC12.42□□□□□ -0.42
Col4a6B1AVK5 AC118639.2-201ENSMUST00000226289 223 ntBASIC12.42□□□□□ -0.42
Col4a6B1AVK5 AC165154.1-201ENSMUST00000226661 340 ntBASIC12.42□□□□□ -0.42
Col4a6B1AVK5 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col4a6B1AVK5 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col4a6B1AVK5 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col4a6B1AVK5 Gm4744-201ENSMUST00000073642 792 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Col4a6B1AVK5 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Col4a6B1AVK5 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col4a6B1AVK5 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col4a6B1AVK5 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Col4a6B1AVK5 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col4a6B1AVK5 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Col4a6B1AVK5 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col4a6B1AVK5 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col4a6B1AVK5 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Col4a6B1AVK5 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col4a6B1AVK5 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Col4a6B1AVK5 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col4a6B1AVK5 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Col4a6B1AVK5 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col4a6B1AVK5 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Col4a6B1AVK5 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Col4a6B1AVK5 Gm8899-201ENSMUST00000214635 1332 ntBASIC12.42□□□□□ -0.42
Col4a6B1AVK5 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Col4a6B1AVK5 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Col4a6B1AVK5 Gtf2h5-202ENSMUST00000100955 879 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col4a6B1AVK5 Gm13791-201ENSMUST00000123263 608 ntTSL 3 BASIC12.42□□□□□ -0.42
Col4a6B1AVK5 Prr33-202ENSMUST00000151580 399 ntTSL 5 BASIC12.42□□□□□ -0.42
Col4a6B1AVK5 Gm16271-201ENSMUST00000162837 220 ntTSL 5 BASIC12.42□□□□□ -0.42
Col4a6B1AVK5 Gm4862-201ENSMUST00000170405 438 ntBASIC12.42□□□□□ -0.42
Col4a6B1AVK5 Mrpl20-206ENSMUST00000185148 494 ntTSL 3 BASIC12.42□□□□□ -0.42
Col4a6B1AVK5 Gm7596-202ENSMUST00000202171 737 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Col4a6B1AVK5 Gng8-202ENSMUST00000205459 522 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.42
Col4a6B1AVK5 Gm18561-201ENSMUST00000206027 804 ntBASIC12.42□□□□□ -0.42
Col4a6B1AVK5 Gm45592-201ENSMUST00000209605 1043 ntBASIC12.42□□□□□ -0.42
Col4a6B1AVK5 Gm30671-201ENSMUST00000214898 318 ntBASIC12.42□□□□□ -0.42
Col4a6B1AVK5 Lgi3-203ENSMUST00000226548 1001 ntBASIC12.42□□□□□ -0.42
Col4a6B1AVK5 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col4a6B1AVK5 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC12.41□□□□□ -0.42
Col4a6B1AVK5 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col4a6B1AVK5 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Col4a6B1AVK5 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Col4a6B1AVK5 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col4a6B1AVK5 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Col4a6B1AVK5 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Col4a6B1AVK5 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col4a6B1AVK5 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col4a6B1AVK5 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Col4a6B1AVK5 Bmp4-202ENSMUST00000100676 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col4a6B1AVK5 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col4a6B1AVK5 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col4a6B1AVK5 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Col4a6B1AVK5 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Col4a6B1AVK5 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col4a6B1AVK5 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Col4a6B1AVK5 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms