Protein–RNA interactions for Protein: A0AUP1

Ccdc112, Coiled-coil domain-containing protein 112, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc112A0AUP1 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc112A0AUP1 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc112A0AUP1 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc112A0AUP1 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc112A0AUP1 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc112A0AUP1 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Ccdc112A0AUP1 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc112A0AUP1 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Ccdc112A0AUP1 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc112A0AUP1 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc112A0AUP1 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc112A0AUP1 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc112A0AUP1 Gm42943-201ENSMUST00000199676 3242 ntBASIC14.07□□□□□ -0.16
Ccdc112A0AUP1 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc112A0AUP1 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc112A0AUP1 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc112A0AUP1 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC14.07□□□□□ -0.16
Ccdc112A0AUP1 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC14.07□□□□□ -0.16
Ccdc112A0AUP1 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc112A0AUP1 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc112A0AUP1 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc112A0AUP1 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC14.07□□□□□ -0.16
Ccdc112A0AUP1 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC14.07□□□□□ -0.16
Ccdc112A0AUP1 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC14.07□□□□□ -0.16
Ccdc112A0AUP1 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc112A0AUP1 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC14.07□□□□□ -0.16
Ccdc112A0AUP1 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc112A0AUP1 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC14.07□□□□□ -0.16
Ccdc112A0AUP1 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc112A0AUP1 Gm43818-201ENSMUST00000200605 466 ntBASIC14.07□□□□□ -0.16
Ccdc112A0AUP1 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC14.07□□□□□ -0.16
Ccdc112A0AUP1 Gm5904-201ENSMUST00000210286 865 ntBASIC14.07□□□□□ -0.16
Ccdc112A0AUP1 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Ccdc112A0AUP1 Gm45925-201ENSMUST00000218882 744 ntBASIC14.07□□□□□ -0.16
Ccdc112A0AUP1 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc112A0AUP1 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc112A0AUP1 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc112A0AUP1 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Ccdc112A0AUP1 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Ccdc112A0AUP1 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc112A0AUP1 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc112A0AUP1 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc112A0AUP1 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc112A0AUP1 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc112A0AUP1 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc112A0AUP1 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc112A0AUP1 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc112A0AUP1 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Ccdc112A0AUP1 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc112A0AUP1 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc112A0AUP1 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc112A0AUP1 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc112A0AUP1 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc112A0AUP1 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc112A0AUP1 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc112A0AUP1 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Ccdc112A0AUP1 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc112A0AUP1 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Ccdc112A0AUP1 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc112A0AUP1 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Ccdc112A0AUP1 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Ccdc112A0AUP1 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Ccdc112A0AUP1 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc112A0AUP1 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC14.06□□□□□ -0.16
Ccdc112A0AUP1 Gm11591-201ENSMUST00000120063 702 ntBASIC14.06□□□□□ -0.16
Ccdc112A0AUP1 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC14.06□□□□□ -0.16
Ccdc112A0AUP1 Gm25927-201ENSMUST00000175058 117 ntBASIC14.06□□□□□ -0.16
Ccdc112A0AUP1 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC14.06□□□□□ -0.16
Ccdc112A0AUP1 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC14.06□□□□□ -0.16
Ccdc112A0AUP1 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC14.06□□□□□ -0.16
Ccdc112A0AUP1 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
Ccdc112A0AUP1 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc112A0AUP1 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc112A0AUP1 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Ccdc112A0AUP1 Gm43579-201ENSMUST00000202387 1307 ntBASIC14.06□□□□□ -0.16
Ccdc112A0AUP1 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc112A0AUP1 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc112A0AUP1 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc112A0AUP1 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc112A0AUP1 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC14.06□□□□□ -0.16
Ccdc112A0AUP1 Ptprm-203ENSMUST00000224091 3773 ntBASIC14.06□□□□□ -0.16
Ccdc112A0AUP1 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC14.06□□□□□ -0.16
Ccdc112A0AUP1 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc112A0AUP1 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc112A0AUP1 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc112A0AUP1 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc112A0AUP1 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc112A0AUP1 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc112A0AUP1 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Ccdc112A0AUP1 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC14.05□□□□□ -0.16
Ccdc112A0AUP1 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc112A0AUP1 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc112A0AUP1 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
Ccdc112A0AUP1 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc112A0AUP1 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc112A0AUP1 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc112A0AUP1 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Ccdc112A0AUP1 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc112A0AUP1 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc112A0AUP1 Gm13736-201ENSMUST00000119272 253 ntBASIC14.05□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms