Protein–RNA interactions for Protein: A0A140LIT1

Ccdc194, Coiled-coil domain-containing protein 194, mousemouse

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc194A0A140LIT1 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ccdc194A0A140LIT1 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ccdc194A0A140LIT1 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.45
Ccdc194A0A140LIT1 AC160405.1-201ENSMUST00000218207 1545 ntBASIC12.27□□□□□ -0.45
Ccdc194A0A140LIT1 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc194A0A140LIT1 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Ccdc194A0A140LIT1 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Ccdc194A0A140LIT1 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc194A0A140LIT1 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC12.26□□□□□ -0.45
Ccdc194A0A140LIT1 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc194A0A140LIT1 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc194A0A140LIT1 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC12.26□□□□□ -0.45
Ccdc194A0A140LIT1 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc194A0A140LIT1 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc194A0A140LIT1 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC12.26□□□□□ -0.45
Ccdc194A0A140LIT1 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc194A0A140LIT1 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc194A0A140LIT1 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc194A0A140LIT1 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc194A0A140LIT1 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc194A0A140LIT1 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc194A0A140LIT1 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc194A0A140LIT1 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc194A0A140LIT1 Gm13722-201ENSMUST00000117964 3066 ntBASIC12.26□□□□□ -0.45
Ccdc194A0A140LIT1 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc194A0A140LIT1 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc194A0A140LIT1 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc194A0A140LIT1 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC12.26□□□□□ -0.45
Ccdc194A0A140LIT1 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc194A0A140LIT1 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc194A0A140LIT1 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC12.26□□□□□ -0.45
Ccdc194A0A140LIT1 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC12.26□□□□□ -0.45
Ccdc194A0A140LIT1 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC12.26□□□□□ -0.45
Ccdc194A0A140LIT1 Gm16177-201ENSMUST00000120728 718 ntBASIC12.26□□□□□ -0.45
Ccdc194A0A140LIT1 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC12.26□□□□□ -0.45
Ccdc194A0A140LIT1 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC12.26□□□□□ -0.45
Ccdc194A0A140LIT1 Gm29127-201ENSMUST00000188304 517 ntBASIC12.26□□□□□ -0.45
Ccdc194A0A140LIT1 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC12.26□□□□□ -0.45
Ccdc194A0A140LIT1 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Ccdc194A0A140LIT1 Gm44882-201ENSMUST00000205702 802 ntBASIC12.26□□□□□ -0.45
Ccdc194A0A140LIT1 Gm9299-201ENSMUST00000206392 1140 ntBASIC12.26□□□□□ -0.45
Ccdc194A0A140LIT1 Gm45925-201ENSMUST00000218882 744 ntBASIC12.26□□□□□ -0.45
Ccdc194A0A140LIT1 Tyms-ps-201ENSMUST00000219550 915 ntBASIC12.26□□□□□ -0.45
Ccdc194A0A140LIT1 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc194A0A140LIT1 Gm22058-201ENSMUST00000083393 310 ntBASIC12.26□□□□□ -0.45
Ccdc194A0A140LIT1 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Ccdc194A0A140LIT1 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc194A0A140LIT1 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc194A0A140LIT1 Gm5620-201ENSMUST00000077991 1348 ntBASIC12.26□□□□□ -0.45
Ccdc194A0A140LIT1 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
Ccdc194A0A140LIT1 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc194A0A140LIT1 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Ccdc194A0A140LIT1 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Ccdc194A0A140LIT1 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc194A0A140LIT1 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC12.26□□□□□ -0.45
Ccdc194A0A140LIT1 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc194A0A140LIT1 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc194A0A140LIT1 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc194A0A140LIT1 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc194A0A140LIT1 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc194A0A140LIT1 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc194A0A140LIT1 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc194A0A140LIT1 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC12.26□□□□□ -0.45
Ccdc194A0A140LIT1 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc194A0A140LIT1 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc194A0A140LIT1 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc194A0A140LIT1 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc194A0A140LIT1 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc194A0A140LIT1 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc194A0A140LIT1 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc194A0A140LIT1 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC12.25□□□□□ -0.45
Ccdc194A0A140LIT1 Gm10728-201ENSMUST00000194292 1829 ntBASIC12.25□□□□□ -0.45
Ccdc194A0A140LIT1 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Ccdc194A0A140LIT1 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc194A0A140LIT1 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Ccdc194A0A140LIT1 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc194A0A140LIT1 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc194A0A140LIT1 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc194A0A140LIT1 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc194A0A140LIT1 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC12.25□□□□□ -0.45
Ccdc194A0A140LIT1 Gm9431-201ENSMUST00000119765 1051 ntBASIC12.25□□□□□ -0.45
Ccdc194A0A140LIT1 Gm11597-201ENSMUST00000121423 964 ntBASIC12.25□□□□□ -0.45
Ccdc194A0A140LIT1 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc194A0A140LIT1 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc194A0A140LIT1 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC12.25□□□□□ -0.45
Ccdc194A0A140LIT1 Gm2639-201ENSMUST00000156881 1297 ntBASIC12.25□□□□□ -0.45
Ccdc194A0A140LIT1 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc194A0A140LIT1 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc194A0A140LIT1 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC12.25□□□□□ -0.45
Ccdc194A0A140LIT1 Gm40466-201ENSMUST00000212174 422 ntBASIC12.25□□□□□ -0.45
Ccdc194A0A140LIT1 Gm45930-201ENSMUST00000221330 292 ntBASIC12.25□□□□□ -0.45
Ccdc194A0A140LIT1 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc194A0A140LIT1 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc194A0A140LIT1 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc194A0A140LIT1 Cad-203ENSMUST00000200953 6489 ntTSL 5 BASIC12.25□□□□□ -0.45
Ccdc194A0A140LIT1 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Ccdc194A0A140LIT1 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc194A0A140LIT1 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Ccdc194A0A140LIT1 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc194A0A140LIT1 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 50 ms