Protein–RNA interactions for Protein: Q9R053

Scn11a, Sodium channel protein type 11 subunit alpha, mousemouse

Predictions only

Length 1,765 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn11aQ9R053 Gm44152-201ENSMUST00000205007 1691 ntBASIC14.41□□□□□ -0.1
Scn11aQ9R053 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scn11aQ9R053 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
Scn11aQ9R053 Gm9387-201ENSMUST00000098624 1320 ntBASIC14.4□□□□□ -0.1
Scn11aQ9R053 Ptprs-211ENSMUST00000223859 5588 ntBASIC14.4□□□□□ -0.1
Scn11aQ9R053 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Scn11aQ9R053 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Scn11aQ9R053 AC154747.3-201ENSMUST00000224471 3470 ntBASIC14.4□□□□□ -0.1
Scn11aQ9R053 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Scn11aQ9R053 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Scn11aQ9R053 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Scn11aQ9R053 Cdc42se1-203ENSMUST00000107200 637 ntTSL 3 BASIC14.4□□□□□ -0.1
Scn11aQ9R053 Gm15610-201ENSMUST00000120584 195 ntBASIC14.4□□□□□ -0.1
Scn11aQ9R053 Gm11660-201ENSMUST00000120955 412 ntBASIC14.4□□□□□ -0.1
Scn11aQ9R053 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC14.4□□□□□ -0.1
Scn11aQ9R053 Rnf181-212ENSMUST00000154098 969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Scn11aQ9R053 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Scn11aQ9R053 Mir6998-201ENSMUST00000183343 64 ntBASIC14.4□□□□□ -0.1
Scn11aQ9R053 Gm43186-201ENSMUST00000198130 824 ntBASIC14.4□□□□□ -0.1
Scn11aQ9R053 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Scn11aQ9R053 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC14.4□□□□□ -0.1
Scn11aQ9R053 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
Scn11aQ9R053 Ifnab-201ENSMUST00000071378 1058 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Scn11aQ9R053 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC14.4□□□□□ -0.1
Scn11aQ9R053 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Scn11aQ9R053 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Scn11aQ9R053 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC14.4□□□□□ -0.1
Scn11aQ9R053 Gm37348-201ENSMUST00000193104 1789 ntBASIC14.4□□□□□ -0.1
Scn11aQ9R053 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC14.4□□□□□ -0.1
Scn11aQ9R053 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Scn11aQ9R053 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Scn11aQ9R053 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Scn11aQ9R053 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Scn11aQ9R053 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Scn11aQ9R053 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Scn11aQ9R053 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Scn11aQ9R053 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Scn11aQ9R053 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Scn11aQ9R053 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Scn11aQ9R053 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Scn11aQ9R053 Cenpx-203ENSMUST00000106154 873 ntTSL 2 BASIC14.39□□□□□ -0.11
Scn11aQ9R053 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Scn11aQ9R053 4930502E09Rik-201ENSMUST00000126016 755 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Scn11aQ9R053 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC14.39□□□□□ -0.11
Scn11aQ9R053 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC14.39□□□□□ -0.11
Scn11aQ9R053 Gm18367-201ENSMUST00000176139 600 ntBASIC14.39□□□□□ -0.11
Scn11aQ9R053 Gm21092-201ENSMUST00000178995 955 ntBASIC14.39□□□□□ -0.11
Scn11aQ9R053 Gm28937-201ENSMUST00000185413 695 ntBASIC14.39□□□□□ -0.11
Scn11aQ9R053 Gm29400-201ENSMUST00000187208 695 ntBASIC14.39□□□□□ -0.11
Scn11aQ9R053 Gm28662-201ENSMUST00000188446 695 ntBASIC14.39□□□□□ -0.11
Scn11aQ9R053 Gm28251-201ENSMUST00000188835 695 ntBASIC14.39□□□□□ -0.11
Scn11aQ9R053 Med8-201ENSMUST00000019229 1145 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scn11aQ9R053 Gm37318-201ENSMUST00000194325 695 ntBASIC14.39□□□□□ -0.11
Scn11aQ9R053 Gm38017-201ENSMUST00000194768 695 ntBASIC14.39□□□□□ -0.11
Scn11aQ9R053 Gm37287-201ENSMUST00000195449 695 ntBASIC14.39□□□□□ -0.11
Scn11aQ9R053 Gm37793-201ENSMUST00000195548 695 ntBASIC14.39□□□□□ -0.11
Scn11aQ9R053 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC14.39□□□□□ -0.11
Scn11aQ9R053 Gm45856-201ENSMUST00000212752 416 ntBASIC14.39□□□□□ -0.11
Scn11aQ9R053 Gm6722-201ENSMUST00000221586 390 ntBASIC14.39□□□□□ -0.11
Scn11aQ9R053 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Scn11aQ9R053 Tmem39a-204ENSMUST00000163884 1645 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scn11aQ9R053 Gm11470-201ENSMUST00000118868 1475 ntBASIC14.39□□□□□ -0.11
Scn11aQ9R053 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Scn11aQ9R053 Gm18983-201ENSMUST00000222884 2729 ntBASIC14.39□□□□□ -0.11
Scn11aQ9R053 Gm9129-201ENSMUST00000218173 1689 ntBASIC14.39□□□□□ -0.11
Scn11aQ9R053 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scn11aQ9R053 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scn11aQ9R053 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Scn11aQ9R053 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scn11aQ9R053 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scn11aQ9R053 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC14.39□□□□□ -0.11
Scn11aQ9R053 Gm12948-201ENSMUST00000119406 682 ntBASIC14.39□□□□□ -0.11
Scn11aQ9R053 Gm12036-201ENSMUST00000120008 530 ntBASIC14.39□□□□□ -0.11
Scn11aQ9R053 Gm14441-201ENSMUST00000121960 540 ntBASIC14.39□□□□□ -0.11
Scn11aQ9R053 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scn11aQ9R053 Gm15996-201ENSMUST00000161925 762 ntTSL 5 BASIC14.39□□□□□ -0.11
Scn11aQ9R053 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC14.39□□□□□ -0.11
Scn11aQ9R053 Gm13278-201ENSMUST00000177771 549 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Scn11aQ9R053 Gm13275-201ENSMUST00000178347 549 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Scn11aQ9R053 Gm13277-201ENSMUST00000178480 549 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Scn11aQ9R053 Gm13279-201ENSMUST00000178602 549 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Scn11aQ9R053 Gm13289-201ENSMUST00000179158 549 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Scn11aQ9R053 Gm13276-201ENSMUST00000179372 549 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Scn11aQ9R053 Gm13287-201ENSMUST00000179490 549 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Scn11aQ9R053 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC14.39□□□□□ -0.11
Scn11aQ9R053 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scn11aQ9R053 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Scn11aQ9R053 Mirlet7i-201ENSMUST00000083472 85 ntBASIC14.39□□□□□ -0.11
Scn11aQ9R053 Gm13271-201ENSMUST00000094992 549 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Scn11aQ9R053 Ormdl2-201ENSMUST00000026409 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scn11aQ9R053 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scn11aQ9R053 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scn11aQ9R053 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Scn11aQ9R053 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Scn11aQ9R053 Gm9796-201ENSMUST00000062249 2250 ntBASIC14.38□□□□□ -0.11
Scn11aQ9R053 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Scn11aQ9R053 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Scn11aQ9R053 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Scn11aQ9R053 Gm12856-201ENSMUST00000119471 1293 ntBASIC14.38□□□□□ -0.11
Scn11aQ9R053 Gm11836-201ENSMUST00000121022 441 ntBASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms