Protein–RNA interactions for Protein: Q9R049

Amfr, E3 ubiquitin-protein ligase AMFR, mousemouse

Predictions only

Length 643 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AmfrQ9R049 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
AmfrQ9R049 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
AmfrQ9R049 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
AmfrQ9R049 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
AmfrQ9R049 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
AmfrQ9R049 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
AmfrQ9R049 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
AmfrQ9R049 Gm14760-201ENSMUST00000121831 999 ntBASIC13.82□□□□□ -0.2
AmfrQ9R049 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
AmfrQ9R049 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
AmfrQ9R049 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
AmfrQ9R049 Mir6420-201ENSMUST00000185032 102 ntBASIC13.82□□□□□ -0.2
AmfrQ9R049 Gm6652-201ENSMUST00000186414 1070 ntBASIC13.82□□□□□ -0.2
AmfrQ9R049 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC13.82□□□□□ -0.2
AmfrQ9R049 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
AmfrQ9R049 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
AmfrQ9R049 Gm10371-202ENSMUST00000228010 1081 ntBASIC13.82□□□□□ -0.2
AmfrQ9R049 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
AmfrQ9R049 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
AmfrQ9R049 Gm24526-201ENSMUST00000082921 158 ntBASIC13.82□□□□□ -0.2
AmfrQ9R049 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
AmfrQ9R049 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
AmfrQ9R049 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
AmfrQ9R049 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
AmfrQ9R049 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
AmfrQ9R049 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
AmfrQ9R049 Gm6992-201ENSMUST00000217973 1607 ntBASIC13.82□□□□□ -0.2
AmfrQ9R049 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
AmfrQ9R049 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
AmfrQ9R049 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
AmfrQ9R049 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
AmfrQ9R049 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
AmfrQ9R049 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
AmfrQ9R049 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
AmfrQ9R049 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
AmfrQ9R049 Gm18227-201ENSMUST00000211082 1468 ntBASIC13.81□□□□□ -0.2
AmfrQ9R049 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
AmfrQ9R049 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
AmfrQ9R049 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
AmfrQ9R049 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
AmfrQ9R049 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
AmfrQ9R049 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
AmfrQ9R049 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC13.81□□□□□ -0.2
AmfrQ9R049 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
AmfrQ9R049 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
AmfrQ9R049 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC13.81□□□□□ -0.2
AmfrQ9R049 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC13.81□□□□□ -0.2
AmfrQ9R049 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC13.81□□□□□ -0.2
AmfrQ9R049 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
AmfrQ9R049 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
AmfrQ9R049 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
AmfrQ9R049 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
AmfrQ9R049 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
AmfrQ9R049 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
AmfrQ9R049 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC13.81□□□□□ -0.2
AmfrQ9R049 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
AmfrQ9R049 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC13.81□□□□□ -0.2
AmfrQ9R049 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
AmfrQ9R049 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
AmfrQ9R049 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
AmfrQ9R049 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
AmfrQ9R049 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC13.81□□□□□ -0.2
AmfrQ9R049 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
AmfrQ9R049 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC13.81□□□□□ -0.2
AmfrQ9R049 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
AmfrQ9R049 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
AmfrQ9R049 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
AmfrQ9R049 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
AmfrQ9R049 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
AmfrQ9R049 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
AmfrQ9R049 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
AmfrQ9R049 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC13.8□□□□□ -0.2
AmfrQ9R049 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
AmfrQ9R049 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC13.8□□□□□ -0.2
AmfrQ9R049 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
AmfrQ9R049 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
AmfrQ9R049 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
AmfrQ9R049 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
AmfrQ9R049 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
AmfrQ9R049 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC13.8□□□□□ -0.2
AmfrQ9R049 Gm22323-201ENSMUST00000103832 109 ntBASIC13.8□□□□□ -0.2
AmfrQ9R049 Gm14723-201ENSMUST00000118686 215 ntBASIC13.8□□□□□ -0.2
AmfrQ9R049 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC13.8□□□□□ -0.2
AmfrQ9R049 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC13.8□□□□□ -0.2
AmfrQ9R049 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC13.8□□□□□ -0.2
AmfrQ9R049 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC13.8□□□□□ -0.2
AmfrQ9R049 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
AmfrQ9R049 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
AmfrQ9R049 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC13.8□□□□□ -0.2
AmfrQ9R049 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC13.8□□□□□ -0.2
AmfrQ9R049 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
AmfrQ9R049 Gm45865-201ENSMUST00000211815 945 ntBASIC13.8□□□□□ -0.2
AmfrQ9R049 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
AmfrQ9R049 Gm9368-201ENSMUST00000219348 831 ntBASIC13.8□□□□□ -0.2
AmfrQ9R049 AC165260.3-202ENSMUST00000224550 1031 ntBASIC13.8□□□□□ -0.2
AmfrQ9R049 AC132317.1-201ENSMUST00000227227 962 ntBASIC13.8□□□□□ -0.2
AmfrQ9R049 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
AmfrQ9R049 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
AmfrQ9R049 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
AmfrQ9R049 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms