Protein–RNA interactions for Protein: Q9QWF0

Chaf1a, Chromatin assembly factor 1 subunit A, mousemouse

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1aQ9QWF0 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Chaf1aQ9QWF0 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Chaf1aQ9QWF0 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Chaf1aQ9QWF0 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Chaf1aQ9QWF0 Gm2231-201ENSMUST00000125661 612 ntBASIC13.86□□□□□ -0.19
Chaf1aQ9QWF0 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC13.86□□□□□ -0.19
Chaf1aQ9QWF0 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC13.86□□□□□ -0.19
Chaf1aQ9QWF0 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC13.86□□□□□ -0.19
Chaf1aQ9QWF0 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Chaf1aQ9QWF0 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC13.86□□□□□ -0.19
Chaf1aQ9QWF0 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Chaf1aQ9QWF0 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC13.86□□□□□ -0.19
Chaf1aQ9QWF0 Gm8099-201ENSMUST00000200510 742 ntBASIC13.86□□□□□ -0.19
Chaf1aQ9QWF0 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC13.86□□□□□ -0.19
Chaf1aQ9QWF0 Gm2824-203ENSMUST00000226189 1228 ntBASIC13.86□□□□□ -0.19
Chaf1aQ9QWF0 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Chaf1aQ9QWF0 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Chaf1aQ9QWF0 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Chaf1aQ9QWF0 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC13.86□□□□□ -0.19
Chaf1aQ9QWF0 Aldh3a1-202ENSMUST00000108716 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Chaf1aQ9QWF0 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Chaf1aQ9QWF0 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Chaf1aQ9QWF0 Cog3-203ENSMUST00000227473 4197 ntBASIC13.86□□□□□ -0.19
Chaf1aQ9QWF0 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Chaf1aQ9QWF0 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC13.86□□□□□ -0.19
Chaf1aQ9QWF0 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Chaf1aQ9QWF0 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC13.86□□□□□ -0.19
Chaf1aQ9QWF0 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Chaf1aQ9QWF0 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Chaf1aQ9QWF0 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Chaf1aQ9QWF0 Gm6992-201ENSMUST00000217973 1607 ntBASIC13.86□□□□□ -0.19
Chaf1aQ9QWF0 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Chaf1aQ9QWF0 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Chaf1aQ9QWF0 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Chaf1aQ9QWF0 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Chaf1aQ9QWF0 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Chaf1aQ9QWF0 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Chaf1aQ9QWF0 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Chaf1aQ9QWF0 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Chaf1aQ9QWF0 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Chaf1aQ9QWF0 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Chaf1aQ9QWF0 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC13.85□□□□□ -0.19
Chaf1aQ9QWF0 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Chaf1aQ9QWF0 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Chaf1aQ9QWF0 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Chaf1aQ9QWF0 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Chaf1aQ9QWF0 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Chaf1aQ9QWF0 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Chaf1aQ9QWF0 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Chaf1aQ9QWF0 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Chaf1aQ9QWF0 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC13.85□□□□□ -0.19
Chaf1aQ9QWF0 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Chaf1aQ9QWF0 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC13.85□□□□□ -0.19
Chaf1aQ9QWF0 Gm44772-201ENSMUST00000207623 1191 ntBASIC13.85□□□□□ -0.19
Chaf1aQ9QWF0 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC13.85□□□□□ -0.19
Chaf1aQ9QWF0 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC13.85□□□□□ -0.19
Chaf1aQ9QWF0 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Chaf1aQ9QWF0 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Chaf1aQ9QWF0 Daam2-202ENSMUST00000224595 1926 ntBASIC13.85□□□□□ -0.19
Chaf1aQ9QWF0 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Chaf1aQ9QWF0 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Chaf1aQ9QWF0 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Chaf1aQ9QWF0 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Chaf1aQ9QWF0 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Chaf1aQ9QWF0 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Chaf1aQ9QWF0 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Chaf1aQ9QWF0 Gm5053-201ENSMUST00000208361 1678 ntBASIC13.85□□□□□ -0.19
Chaf1aQ9QWF0 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Chaf1aQ9QWF0 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Chaf1aQ9QWF0 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Chaf1aQ9QWF0 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Chaf1aQ9QWF0 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Chaf1aQ9QWF0 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Chaf1aQ9QWF0 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Chaf1aQ9QWF0 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Chaf1aQ9QWF0 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC13.84□□□□□ -0.19
Chaf1aQ9QWF0 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Chaf1aQ9QWF0 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Chaf1aQ9QWF0 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Chaf1aQ9QWF0 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Chaf1aQ9QWF0 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Chaf1aQ9QWF0 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Chaf1aQ9QWF0 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Chaf1aQ9QWF0 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Chaf1aQ9QWF0 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
Chaf1aQ9QWF0 Gm14921-201ENSMUST00000118643 908 ntBASIC13.84□□□□□ -0.19
Chaf1aQ9QWF0 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC13.84□□□□□ -0.19
Chaf1aQ9QWF0 Gm11637-201ENSMUST00000120601 592 ntBASIC13.84□□□□□ -0.19
Chaf1aQ9QWF0 Gm14760-201ENSMUST00000121831 999 ntBASIC13.84□□□□□ -0.19
Chaf1aQ9QWF0 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Chaf1aQ9QWF0 Gm16296-201ENSMUST00000159905 325 ntBASIC13.84□□□□□ -0.19
Chaf1aQ9QWF0 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Chaf1aQ9QWF0 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC13.84□□□□□ -0.19
Chaf1aQ9QWF0 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC13.84□□□□□ -0.19
Chaf1aQ9QWF0 Gm6652-201ENSMUST00000186414 1070 ntBASIC13.84□□□□□ -0.19
Chaf1aQ9QWF0 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC13.84□□□□□ -0.19
Chaf1aQ9QWF0 Ighv5-13-201ENSMUST00000193550 290 ntBASIC13.84□□□□□ -0.19
Chaf1aQ9QWF0 Gm18187-201ENSMUST00000196476 984 ntBASIC13.84□□□□□ -0.19
Chaf1aQ9QWF0 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Chaf1aQ9QWF0 Gm19163-201ENSMUST00000223313 780 ntBASIC13.84□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 49.4 ms