Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trem1Q9JKE2 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trem1Q9JKE2 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trem1Q9JKE2 Gpr35-202ENSMUST00000064480 3409 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trem1Q9JKE2 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Trem1Q9JKE2 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Trem1Q9JKE2 Gm19299-202ENSMUST00000215724 1435 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Trem1Q9JKE2 Arhgap15os-201ENSMUST00000139948 1761 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Trem1Q9JKE2 Gm22065-201ENSMUST00000103753 110 ntBASIC11.04□□□□□ -0.64
Trem1Q9JKE2 Gm22066-201ENSMUST00000103761 110 ntBASIC11.04□□□□□ -0.64
Trem1Q9JKE2 Gm24932-201ENSMUST00000103763 110 ntBASIC11.04□□□□□ -0.64
Trem1Q9JKE2 Gm24115-201ENSMUST00000103799 110 ntBASIC11.04□□□□□ -0.64
Trem1Q9JKE2 Gm22190-201ENSMUST00000103827 110 ntBASIC11.04□□□□□ -0.64
Trem1Q9JKE2 Gm22191-201ENSMUST00000103831 110 ntBASIC11.04□□□□□ -0.64
Trem1Q9JKE2 Gm24721-201ENSMUST00000103849 110 ntBASIC11.04□□□□□ -0.64
Trem1Q9JKE2 Gm28018-201ENSMUST00000103869 110 ntBASIC11.04□□□□□ -0.64
Trem1Q9JKE2 Gm26399-201ENSMUST00000103937 110 ntBASIC11.04□□□□□ -0.64
Trem1Q9JKE2 Gm8410-201ENSMUST00000117225 605 ntBASIC11.04□□□□□ -0.64
Trem1Q9JKE2 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC11.04□□□□□ -0.64
Trem1Q9JKE2 Gm25349-201ENSMUST00000177728 110 ntBASIC11.04□□□□□ -0.64
Trem1Q9JKE2 Gm23616-201ENSMUST00000177797 110 ntBASIC11.04□□□□□ -0.64
Trem1Q9JKE2 Gm25871-201ENSMUST00000177816 110 ntBASIC11.04□□□□□ -0.64
Trem1Q9JKE2 Gm24752-201ENSMUST00000178240 110 ntBASIC11.04□□□□□ -0.64
Trem1Q9JKE2 Gm24496-201ENSMUST00000178287 110 ntBASIC11.04□□□□□ -0.64
Trem1Q9JKE2 Gm25649-201ENSMUST00000178476 110 ntBASIC11.04□□□□□ -0.64
Trem1Q9JKE2 Gm25548-201ENSMUST00000178681 110 ntBASIC11.04□□□□□ -0.64
Trem1Q9JKE2 Gm23147-201ENSMUST00000178841 110 ntBASIC11.04□□□□□ -0.64
Trem1Q9JKE2 Gm26095-201ENSMUST00000179270 110 ntBASIC11.04□□□□□ -0.64
Trem1Q9JKE2 Gm22171-201ENSMUST00000179283 110 ntBASIC11.04□□□□□ -0.64
Trem1Q9JKE2 Gm23936-201ENSMUST00000179354 110 ntBASIC11.04□□□□□ -0.64
Trem1Q9JKE2 Gm22619-201ENSMUST00000179516 110 ntBASIC11.04□□□□□ -0.64
Trem1Q9JKE2 Gm25255-201ENSMUST00000179579 110 ntBASIC11.04□□□□□ -0.64
Trem1Q9JKE2 Gm24755-201ENSMUST00000179691 110 ntBASIC11.04□□□□□ -0.64
Trem1Q9JKE2 Gm26506-201ENSMUST00000179692 110 ntBASIC11.04□□□□□ -0.64
Trem1Q9JKE2 Gm25086-201ENSMUST00000179931 110 ntBASIC11.04□□□□□ -0.64
Trem1Q9JKE2 Gm23243-201ENSMUST00000180047 110 ntBASIC11.04□□□□□ -0.64
Trem1Q9JKE2 Gm24659-201ENSMUST00000180212 110 ntBASIC11.04□□□□□ -0.64
Trem1Q9JKE2 Gm24169-201ENSMUST00000180244 110 ntBASIC11.04□□□□□ -0.64
Trem1Q9JKE2 Gm23689-201ENSMUST00000180354 110 ntBASIC11.04□□□□□ -0.64
Trem1Q9JKE2 Gm27359-201ENSMUST00000184153 110 ntBASIC11.04□□□□□ -0.64
Trem1Q9JKE2 Gm27785-201ENSMUST00000184268 110 ntBASIC11.04□□□□□ -0.64
Trem1Q9JKE2 Gm27466-201ENSMUST00000184396 110 ntBASIC11.04□□□□□ -0.64
Trem1Q9JKE2 Gm27703-201ENSMUST00000184836 110 ntBASIC11.04□□□□□ -0.64
Trem1Q9JKE2 Supt16-201ENSMUST00000046709 4673 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trem1Q9JKE2 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Trem1Q9JKE2 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trem1Q9JKE2 Slc20a1-201ENSMUST00000028880 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trem1Q9JKE2 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Trem1Q9JKE2 Pax6-225ENSMUST00000167211 2814 ntAPPRIS P3 TSL 5 BASIC11.04□□□□□ -0.64
Trem1Q9JKE2 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Trem1Q9JKE2 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trem1Q9JKE2 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Trem1Q9JKE2 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC11.04□□□□□ -0.64
Trem1Q9JKE2 Dqx1-201ENSMUST00000077502 3257 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Trem1Q9JKE2 Sept9-204ENSMUST00000106349 2932 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trem1Q9JKE2 Avil-203ENSMUST00000129173 2925 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Trem1Q9JKE2 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC11.04□□□□□ -0.64
Trem1Q9JKE2 Chml-204ENSMUST00000211207 1866 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Trem1Q9JKE2 Exoc3l4-201ENSMUST00000072646 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trem1Q9JKE2 Gm5320-201ENSMUST00000207163 1519 ntBASIC11.04□□□□□ -0.64
Trem1Q9JKE2 Lmo3-207ENSMUST00000163065 2425 ntTSL 3 BASIC11.04□□□□□ -0.64
Trem1Q9JKE2 Mob3b-201ENSMUST00000102975 6030 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trem1Q9JKE2 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trem1Q9JKE2 Fer1l4-201ENSMUST00000109611 6106 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Trem1Q9JKE2 Gm42571-201ENSMUST00000201197 2464 ntBASIC11.03□□□□□ -0.64
Trem1Q9JKE2 Epx-201ENSMUST00000049768 2689 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trem1Q9JKE2 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trem1Q9JKE2 Unc45a-202ENSMUST00000107368 3635 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Trem1Q9JKE2 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC11.03□□□□□ -0.64
Trem1Q9JKE2 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Trem1Q9JKE2 Wbp1l-202ENSMUST00000111855 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trem1Q9JKE2 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Trem1Q9JKE2 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trem1Q9JKE2 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trem1Q9JKE2 Ptbp1-206ENSMUST00000165704 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trem1Q9JKE2 Abcf1-201ENSMUST00000043757 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trem1Q9JKE2 Mfap3l-204ENSMUST00000161702 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trem1Q9JKE2 Ints6l-201ENSMUST00000039374 3766 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trem1Q9JKE2 Ces2h-201ENSMUST00000172032 2445 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Trem1Q9JKE2 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trem1Q9JKE2 Prkd2-201ENSMUST00000086104 3628 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trem1Q9JKE2 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trem1Q9JKE2 Gm6415-201ENSMUST00000118488 348 ntBASIC11.03□□□□□ -0.64
Trem1Q9JKE2 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC11.03□□□□□ -0.64
Trem1Q9JKE2 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Trem1Q9JKE2 Gm24158-201ENSMUST00000175263 71 ntBASIC11.03□□□□□ -0.64
Trem1Q9JKE2 Gm4804-201ENSMUST00000182234 999 ntBASIC11.03□□□□□ -0.64
Trem1Q9JKE2 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Trem1Q9JKE2 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Trem1Q9JKE2 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC11.03□□□□□ -0.64
Trem1Q9JKE2 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Trem1Q9JKE2 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Trem1Q9JKE2 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Trem1Q9JKE2 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trem1Q9JKE2 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Trem1Q9JKE2 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trem1Q9JKE2 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trem1Q9JKE2 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Trem1Q9JKE2 Ptprr-206ENSMUST00000148731 2511 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Trem1Q9JKE2 Xpnpep1-211ENSMUST00000183274 2120 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 63.5 ms