Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Ube3bQ9ES34 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ube3bQ9ES34 Gm5455-201ENSMUST00000058710 715 ntBASIC14.68□□□□□ -0.06
Ube3bQ9ES34 Gemin6-201ENSMUST00000069486 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ube3bQ9ES34 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Ube3bQ9ES34 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Ube3bQ9ES34 Gm44758-201ENSMUST00000206096 2068 ntBASIC14.68□□□□□ -0.06
Ube3bQ9ES34 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Ube3bQ9ES34 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ube3bQ9ES34 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Ube3bQ9ES34 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC14.68□□□□□ -0.06
Ube3bQ9ES34 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ube3bQ9ES34 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ube3bQ9ES34 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ube3bQ9ES34 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Ube3bQ9ES34 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ube3bQ9ES34 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ube3bQ9ES34 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ube3bQ9ES34 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ube3bQ9ES34 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ube3bQ9ES34 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Ube3bQ9ES34 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Ube3bQ9ES34 Adra1a-206ENSMUST00000225182 2337 ntBASIC14.67□□□□□ -0.06
Ube3bQ9ES34 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Ube3bQ9ES34 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Ube3bQ9ES34 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Ube3bQ9ES34 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Ube3bQ9ES34 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Ube3bQ9ES34 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Ube3bQ9ES34 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Ube3bQ9ES34 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ube3bQ9ES34 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ube3bQ9ES34 Cdk5rap1-202ENSMUST00000109730 1227 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Ube3bQ9ES34 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC14.67□□□□□ -0.06
Ube3bQ9ES34 Gm7857-201ENSMUST00000117957 358 ntBASIC14.67□□□□□ -0.06
Ube3bQ9ES34 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC14.67□□□□□ -0.06
Ube3bQ9ES34 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC14.67□□□□□ -0.06
Ube3bQ9ES34 Gm20825-201ENSMUST00000178149 1226 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ube3bQ9ES34 Gm27627-201ENSMUST00000183644 150 ntBASIC14.67□□□□□ -0.06
Ube3bQ9ES34 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Ube3bQ9ES34 Gm45696-201ENSMUST00000212088 985 ntBASIC14.67□□□□□ -0.06
Ube3bQ9ES34 AC107638.1-201ENSMUST00000213690 1061 ntBASIC14.67□□□□□ -0.06
Ube3bQ9ES34 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC14.67□□□□□ -0.06
Ube3bQ9ES34 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ube3bQ9ES34 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ube3bQ9ES34 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Ube3bQ9ES34 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Ube3bQ9ES34 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Ube3bQ9ES34 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ube3bQ9ES34 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Ube3bQ9ES34 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Ube3bQ9ES34 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Ube3bQ9ES34 AC154849.3-201ENSMUST00000223733 1660 ntBASIC14.67□□□□□ -0.06
Ube3bQ9ES34 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ube3bQ9ES34 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ube3bQ9ES34 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ube3bQ9ES34 Gm44292-201ENSMUST00000205194 2364 ntBASIC14.67□□□□□ -0.06
Ube3bQ9ES34 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ube3bQ9ES34 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC14.67□□□□□ -0.06
Ube3bQ9ES34 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC14.66□□□□□ -0.06
Ube3bQ9ES34 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
Ube3bQ9ES34 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ube3bQ9ES34 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ube3bQ9ES34 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
Ube3bQ9ES34 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
Ube3bQ9ES34 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC14.66□□□□□ -0.06
Ube3bQ9ES34 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Ube3bQ9ES34 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ube3bQ9ES34 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Ube3bQ9ES34 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Ube3bQ9ES34 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ube3bQ9ES34 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ube3bQ9ES34 Gm37513-201ENSMUST00000194830 2268 ntBASIC14.66□□□□□ -0.06
Ube3bQ9ES34 Gm38378-201ENSMUST00000195153 2268 ntBASIC14.66□□□□□ -0.06
Ube3bQ9ES34 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC14.66□□□□□ -0.06
Ube3bQ9ES34 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ube3bQ9ES34 Gm4909-201ENSMUST00000118749 794 ntBASIC14.66□□□□□ -0.06
Ube3bQ9ES34 Gm12164-201ENSMUST00000121695 551 ntBASIC14.66□□□□□ -0.06
Ube3bQ9ES34 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
Ube3bQ9ES34 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC14.66□□□□□ -0.06
Ube3bQ9ES34 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC14.66□□□□□ -0.06
Ube3bQ9ES34 AC153961.1-201ENSMUST00000217760 385 ntBASIC14.66□□□□□ -0.06
Ube3bQ9ES34 Gm21027-201ENSMUST00000219300 1236 ntBASIC14.66□□□□□ -0.06
Ube3bQ9ES34 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ube3bQ9ES34 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ube3bQ9ES34 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ube3bQ9ES34 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ube3bQ9ES34 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ube3bQ9ES34 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Ube3bQ9ES34 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Ube3bQ9ES34 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ube3bQ9ES34 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC14.66□□□□□ -0.06
Ube3bQ9ES34 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ube3bQ9ES34 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Ube3bQ9ES34 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ube3bQ9ES34 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Ube3bQ9ES34 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Ube3bQ9ES34 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ube3bQ9ES34 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ube3bQ9ES34 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 75.4 ms