Protein–RNA interactions for Protein: Q9ER80

Rtp4, Receptor-transporting protein 4, mousemouse

Known RBP Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtp4Q9ER80 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rtp4Q9ER80 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rtp4Q9ER80 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Rtp4Q9ER80 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rtp4Q9ER80 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rtp4Q9ER80 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rtp4Q9ER80 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rtp4Q9ER80 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rtp4Q9ER80 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rtp4Q9ER80 Gm44806-201ENSMUST00000205574 2303 ntBASIC11.6□□□□□ -0.55
Rtp4Q9ER80 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rtp4Q9ER80 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC11.6□□□□□ -0.55
Rtp4Q9ER80 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rtp4Q9ER80 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rtp4Q9ER80 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rtp4Q9ER80 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rtp4Q9ER80 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rtp4Q9ER80 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rtp4Q9ER80 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rtp4Q9ER80 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rtp4Q9ER80 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rtp4Q9ER80 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rtp4Q9ER80 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Rtp4Q9ER80 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Rtp4Q9ER80 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC11.6□□□□□ -0.55
Rtp4Q9ER80 Gm13875-201ENSMUST00000120162 282 ntBASIC11.6□□□□□ -0.55
Rtp4Q9ER80 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Rtp4Q9ER80 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Rtp4Q9ER80 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC11.6□□□□□ -0.55
Rtp4Q9ER80 Gm23363-201ENSMUST00000175024 79 ntBASIC11.6□□□□□ -0.55
Rtp4Q9ER80 Gm9630-201ENSMUST00000178304 885 ntBASIC11.6□□□□□ -0.55
Rtp4Q9ER80 Gm4819-201ENSMUST00000182170 1009 ntBASIC11.6□□□□□ -0.55
Rtp4Q9ER80 Gm26956-201ENSMUST00000182176 986 ntBASIC11.6□□□□□ -0.55
Rtp4Q9ER80 Gm2546-201ENSMUST00000182630 991 ntBASIC11.6□□□□□ -0.55
Rtp4Q9ER80 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC11.6□□□□□ -0.55
Rtp4Q9ER80 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC11.6□□□□□ -0.55
Rtp4Q9ER80 4921527H02Rik-201ENSMUST00000196028 246 ntBASIC11.6□□□□□ -0.55
Rtp4Q9ER80 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC11.6□□□□□ -0.55
Rtp4Q9ER80 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC11.6□□□□□ -0.55
Rtp4Q9ER80 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rtp4Q9ER80 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Rtp4Q9ER80 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Rtp4Q9ER80 Gm5950-201ENSMUST00000213337 772 ntBASIC11.6□□□□□ -0.55
Rtp4Q9ER80 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rtp4Q9ER80 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rtp4Q9ER80 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rtp4Q9ER80 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rtp4Q9ER80 Gm22058-201ENSMUST00000083393 310 ntBASIC11.6□□□□□ -0.55
Rtp4Q9ER80 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC11.6□□□□□ -0.55
Rtp4Q9ER80 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rtp4Q9ER80 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rtp4Q9ER80 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rtp4Q9ER80 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rtp4Q9ER80 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC11.6□□□□□ -0.55
Rtp4Q9ER80 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
Rtp4Q9ER80 AC167669.2-201ENSMUST00000224417 1620 ntBASIC11.6□□□□□ -0.55
Rtp4Q9ER80 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rtp4Q9ER80 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rtp4Q9ER80 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rtp4Q9ER80 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rtp4Q9ER80 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rtp4Q9ER80 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC11.6□□□□□ -0.55
Rtp4Q9ER80 Gm4366-201ENSMUST00000201488 1342 ntBASIC11.6□□□□□ -0.55
Rtp4Q9ER80 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
Rtp4Q9ER80 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rtp4Q9ER80 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Rtp4Q9ER80 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC11.59□□□□□ -0.55
Rtp4Q9ER80 Paupar-201ENSMUST00000194826 3482 ntBASIC11.59□□□□□ -0.55
Rtp4Q9ER80 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Rtp4Q9ER80 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Rtp4Q9ER80 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Rtp4Q9ER80 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
Rtp4Q9ER80 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Rtp4Q9ER80 Gm2420-201ENSMUST00000119864 2149 ntBASIC11.59□□□□□ -0.55
Rtp4Q9ER80 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC11.59□□□□□ -0.55
Rtp4Q9ER80 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC11.59□□□□□ -0.55
Rtp4Q9ER80 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Rtp4Q9ER80 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Rtp4Q9ER80 Gm7993-201ENSMUST00000200970 1384 ntBASIC11.59□□□□□ -0.55
Rtp4Q9ER80 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Rtp4Q9ER80 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Rtp4Q9ER80 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Rtp4Q9ER80 Gm25214-201ENSMUST00000104573 129 ntBASIC11.59□□□□□ -0.55
Rtp4Q9ER80 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC11.59□□□□□ -0.55
Rtp4Q9ER80 Gm12715-201ENSMUST00000121430 1128 ntBASIC11.59□□□□□ -0.55
Rtp4Q9ER80 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Rtp4Q9ER80 1110059E24Rik-205ENSMUST00000178523 629 ntTSL 3 BASIC11.59□□□□□ -0.55
Rtp4Q9ER80 Gm2383-201ENSMUST00000181461 807 ntBASIC11.59□□□□□ -0.55
Rtp4Q9ER80 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC11.59□□□□□ -0.55
Rtp4Q9ER80 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC11.59□□□□□ -0.55
Rtp4Q9ER80 Gm31256-201ENSMUST00000194705 506 ntBASIC11.59□□□□□ -0.55
Rtp4Q9ER80 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC11.59□□□□□ -0.55
Rtp4Q9ER80 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC11.59□□□□□ -0.55
Rtp4Q9ER80 Gm45878-201ENSMUST00000211839 241 ntBASIC11.59□□□□□ -0.55
Rtp4Q9ER80 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC11.59□□□□□ -0.55
Rtp4Q9ER80 Gm17872-201ENSMUST00000222550 532 ntBASIC11.59□□□□□ -0.55
Rtp4Q9ER80 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Rtp4Q9ER80 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC11.59□□□□□ -0.55
Rtp4Q9ER80 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Rtp4Q9ER80 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms