Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Chmp2aQ9DB34 Gm29100-201ENSMUST00000187564 4410 ntBASIC12.9□□□□□ -0.34
Chmp2aQ9DB34 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Chmp2aQ9DB34 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Chmp2aQ9DB34 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Chmp2aQ9DB34 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Chmp2aQ9DB34 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Chmp2aQ9DB34 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Chmp2aQ9DB34 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Chmp2aQ9DB34 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Chmp2aQ9DB34 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.35
Chmp2aQ9DB34 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Chmp2aQ9DB34 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.35
Chmp2aQ9DB34 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Chmp2aQ9DB34 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Chmp2aQ9DB34 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Chmp2aQ9DB34 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Chmp2aQ9DB34 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Chmp2aQ9DB34 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Chmp2aQ9DB34 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Chmp2aQ9DB34 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Chmp2aQ9DB34 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Chmp2aQ9DB34 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Chmp2aQ9DB34 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Chmp2aQ9DB34 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Chmp2aQ9DB34 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Chmp2aQ9DB34 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Chmp2aQ9DB34 Gm7584-201ENSMUST00000175829 940 ntBASIC12.89□□□□□ -0.35
Chmp2aQ9DB34 Gm43758-201ENSMUST00000199500 367 ntBASIC12.89□□□□□ -0.35
Chmp2aQ9DB34 Gm3961-201ENSMUST00000204425 994 ntBASIC12.89□□□□□ -0.35
Chmp2aQ9DB34 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Chmp2aQ9DB34 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Chmp2aQ9DB34 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Chmp2aQ9DB34 AC126262.1-201ENSMUST00000221802 1904 ntBASIC12.89□□□□□ -0.35
Chmp2aQ9DB34 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Chmp2aQ9DB34 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Chmp2aQ9DB34 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Chmp2aQ9DB34 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Chmp2aQ9DB34 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Chmp2aQ9DB34 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Chmp2aQ9DB34 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Chmp2aQ9DB34 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Chmp2aQ9DB34 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC12.88□□□□□ -0.35
Chmp2aQ9DB34 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Chmp2aQ9DB34 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Chmp2aQ9DB34 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Chmp2aQ9DB34 Gm10305-201ENSMUST00000195331 2475 ntBASIC12.88□□□□□ -0.35
Chmp2aQ9DB34 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Chmp2aQ9DB34 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Chmp2aQ9DB34 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC12.88□□□□□ -0.35
Chmp2aQ9DB34 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Chmp2aQ9DB34 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Chmp2aQ9DB34 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Chmp2aQ9DB34 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Chmp2aQ9DB34 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Chmp2aQ9DB34 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Chmp2aQ9DB34 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Chmp2aQ9DB34 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Chmp2aQ9DB34 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Chmp2aQ9DB34 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Chmp2aQ9DB34 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
Chmp2aQ9DB34 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Chmp2aQ9DB34 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC12.88□□□□□ -0.35
Chmp2aQ9DB34 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Chmp2aQ9DB34 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Chmp2aQ9DB34 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC12.88□□□□□ -0.35
Chmp2aQ9DB34 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC12.88□□□□□ -0.35
Chmp2aQ9DB34 Gm27243-201ENSMUST00000183964 521 ntBASIC12.88□□□□□ -0.35
Chmp2aQ9DB34 Gm38341-201ENSMUST00000195357 515 ntBASIC12.88□□□□□ -0.35
Chmp2aQ9DB34 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC12.88□□□□□ -0.35
Chmp2aQ9DB34 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Chmp2aQ9DB34 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Chmp2aQ9DB34 Gm9004-201ENSMUST00000218739 1222 ntBASIC12.88□□□□□ -0.35
Chmp2aQ9DB34 CT025533.2-201ENSMUST00000228715 1248 ntBASIC12.88□□□□□ -0.35
Chmp2aQ9DB34 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Chmp2aQ9DB34 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Chmp2aQ9DB34 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Chmp2aQ9DB34 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Chmp2aQ9DB34 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Chmp2aQ9DB34 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Chmp2aQ9DB34 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Chmp2aQ9DB34 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Chmp2aQ9DB34 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Chmp2aQ9DB34 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Chmp2aQ9DB34 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Chmp2aQ9DB34 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Chmp2aQ9DB34 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Chmp2aQ9DB34 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Chmp2aQ9DB34 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Chmp2aQ9DB34 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Chmp2aQ9DB34 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Chmp2aQ9DB34 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Chmp2aQ9DB34 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC12.88□□□□□ -0.35
Chmp2aQ9DB34 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC12.87□□□□□ -0.35
Chmp2aQ9DB34 Gm27196-201ENSMUST00000184787 2582 ntBASIC12.87□□□□□ -0.35
Chmp2aQ9DB34 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Chmp2aQ9DB34 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Chmp2aQ9DB34 Gm45003-201ENSMUST00000205875 2158 ntBASIC12.87□□□□□ -0.35
Chmp2aQ9DB34 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Chmp2aQ9DB34 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms