Protein–RNA interactions for Protein: Q9D541

Ccdc7, Coiled-coil domain-containing protein 7, mousemouse

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc7Q9D541 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc7Q9D541 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC14.41□□□□□ -0.1
Ccdc7Q9D541 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc7Q9D541 Gm24934-201ENSMUST00000103764 111 ntBASIC14.41□□□□□ -0.1
Ccdc7Q9D541 Gm23931-201ENSMUST00000103842 109 ntBASIC14.41□□□□□ -0.1
Ccdc7Q9D541 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc7Q9D541 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Ccdc7Q9D541 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc7Q9D541 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc7Q9D541 Gm27514-201ENSMUST00000183692 110 ntBASIC14.41□□□□□ -0.1
Ccdc7Q9D541 Gm45784-201ENSMUST00000188360 142 ntBASIC14.41□□□□□ -0.1
Ccdc7Q9D541 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Ccdc7Q9D541 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
Ccdc7Q9D541 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc7Q9D541 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc7Q9D541 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Ccdc7Q9D541 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC14.41□□□□□ -0.1
Ccdc7Q9D541 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC14.41□□□□□ -0.1
Ccdc7Q9D541 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc7Q9D541 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc7Q9D541 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc7Q9D541 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc7Q9D541 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc7Q9D541 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc7Q9D541 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Ccdc7Q9D541 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc7Q9D541 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc7Q9D541 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc7Q9D541 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc7Q9D541 Gm45428-201ENSMUST00000209619 1789 ntBASIC14.4□□□□□ -0.1
Ccdc7Q9D541 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Ccdc7Q9D541 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc7Q9D541 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc7Q9D541 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc7Q9D541 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc7Q9D541 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc7Q9D541 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc7Q9D541 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Ccdc7Q9D541 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc7Q9D541 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc7Q9D541 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
Ccdc7Q9D541 Gm15172-201ENSMUST00000118945 1046 ntBASIC14.4□□□□□ -0.1
Ccdc7Q9D541 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc7Q9D541 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc7Q9D541 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc7Q9D541 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC14.4□□□□□ -0.1
Ccdc7Q9D541 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC14.4□□□□□ -0.1
Ccdc7Q9D541 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC14.4□□□□□ -0.1
Ccdc7Q9D541 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC14.4□□□□□ -0.1
Ccdc7Q9D541 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc7Q9D541 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC14.4□□□□□ -0.1
Ccdc7Q9D541 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc7Q9D541 AC166095.1-201ENSMUST00000223731 1241 ntBASIC14.4□□□□□ -0.1
Ccdc7Q9D541 AC154462.2-201ENSMUST00000227519 370 ntBASIC14.4□□□□□ -0.1
Ccdc7Q9D541 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC14.4□□□□□ -0.1
Ccdc7Q9D541 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc7Q9D541 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc7Q9D541 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc7Q9D541 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc7Q9D541 Gm8522-201ENSMUST00000118416 1929 ntBASIC14.4□□□□□ -0.1
Ccdc7Q9D541 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc7Q9D541 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc7Q9D541 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC14.4□□□□□ -0.1
Ccdc7Q9D541 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc7Q9D541 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc7Q9D541 Dctn4-202ENSMUST00000223590 1530 ntBASIC14.4□□□□□ -0.1
Ccdc7Q9D541 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc7Q9D541 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC14.4□□□□□ -0.1
Ccdc7Q9D541 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc7Q9D541 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc7Q9D541 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC14.4□□□□□ -0.1
Ccdc7Q9D541 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc7Q9D541 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc7Q9D541 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc7Q9D541 Gm42943-201ENSMUST00000199676 3242 ntBASIC14.39□□□□□ -0.11
Ccdc7Q9D541 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc7Q9D541 AC093022.4-203ENSMUST00000228523 2657 ntBASIC14.39□□□□□ -0.11
Ccdc7Q9D541 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Ccdc7Q9D541 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc7Q9D541 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Ccdc7Q9D541 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc7Q9D541 Gm37542-201ENSMUST00000192563 2832 ntBASIC14.39□□□□□ -0.11
Ccdc7Q9D541 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc7Q9D541 Gm13142-201ENSMUST00000117213 1453 ntBASIC14.39□□□□□ -0.11
Ccdc7Q9D541 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc7Q9D541 Gm22018-201ENSMUST00000104357 131 ntBASIC14.39□□□□□ -0.11
Ccdc7Q9D541 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc7Q9D541 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Ccdc7Q9D541 Gm37201-201ENSMUST00000191845 523 ntBASIC14.39□□□□□ -0.11
Ccdc7Q9D541 Gm37748-201ENSMUST00000194379 1140 ntBASIC14.39□□□□□ -0.11
Ccdc7Q9D541 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC14.39□□□□□ -0.11
Ccdc7Q9D541 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc7Q9D541 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc7Q9D541 Gm2673-201ENSMUST00000120958 1608 ntBASIC14.39□□□□□ -0.11
Ccdc7Q9D541 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc7Q9D541 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc7Q9D541 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc7Q9D541 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Ccdc7Q9D541 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Ccdc7Q9D541 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms