Protein–RNA interactions for Protein: Q9D394

Rufy3, Protein RUFY3, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rufy3Q9D394 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Rufy3Q9D394 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rufy3Q9D394 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rufy3Q9D394 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Rufy3Q9D394 Gm2606-201ENSMUST00000100754 1002 ntBASIC14.46□□□□□ -0.09
Rufy3Q9D394 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rufy3Q9D394 Gm12286-201ENSMUST00000119246 1002 ntBASIC14.46□□□□□ -0.09
Rufy3Q9D394 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Rufy3Q9D394 Mir1982-201ENSMUST00000157368 74 ntBASIC14.46□□□□□ -0.09
Rufy3Q9D394 Gm37008-201ENSMUST00000195712 319 ntBASIC14.46□□□□□ -0.09
Rufy3Q9D394 Gm35960-201ENSMUST00000202712 767 ntBASIC14.46□□□□□ -0.09
Rufy3Q9D394 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
Rufy3Q9D394 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Rufy3Q9D394 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC14.46□□□□□ -0.09
Rufy3Q9D394 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC14.46□□□□□ -0.09
Rufy3Q9D394 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rufy3Q9D394 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rufy3Q9D394 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rufy3Q9D394 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rufy3Q9D394 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC14.46□□□□□ -0.09
Rufy3Q9D394 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.09
Rufy3Q9D394 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC14.46□□□□□ -0.1
Rufy3Q9D394 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
Rufy3Q9D394 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Rufy3Q9D394 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rufy3Q9D394 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rufy3Q9D394 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rufy3Q9D394 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rufy3Q9D394 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Rufy3Q9D394 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Rufy3Q9D394 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Rufy3Q9D394 Gm37737-201ENSMUST00000195013 1638 ntBASIC14.45□□□□□ -0.1
Rufy3Q9D394 AC130671.2-201ENSMUST00000227224 1621 ntBASIC14.45□□□□□ -0.1
Rufy3Q9D394 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rufy3Q9D394 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC14.45□□□□□ -0.1
Rufy3Q9D394 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Rufy3Q9D394 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rufy3Q9D394 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rufy3Q9D394 Gm12058-201ENSMUST00000118614 437 ntBASIC14.45□□□□□ -0.1
Rufy3Q9D394 Gm14999-201ENSMUST00000121039 624 ntBASIC14.45□□□□□ -0.1
Rufy3Q9D394 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Rufy3Q9D394 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Rufy3Q9D394 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Rufy3Q9D394 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rufy3Q9D394 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rufy3Q9D394 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC14.45□□□□□ -0.1
Rufy3Q9D394 Gm18187-201ENSMUST00000196476 984 ntBASIC14.45□□□□□ -0.1
Rufy3Q9D394 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC14.45□□□□□ -0.1
Rufy3Q9D394 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC14.45□□□□□ -0.1
Rufy3Q9D394 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC14.45□□□□□ -0.1
Rufy3Q9D394 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Rufy3Q9D394 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rufy3Q9D394 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rufy3Q9D394 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Rufy3Q9D394 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rufy3Q9D394 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rufy3Q9D394 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Rufy3Q9D394 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rufy3Q9D394 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Rufy3Q9D394 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Rufy3Q9D394 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Rufy3Q9D394 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rufy3Q9D394 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rufy3Q9D394 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Rufy3Q9D394 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rufy3Q9D394 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
Rufy3Q9D394 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rufy3Q9D394 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rufy3Q9D394 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Rufy3Q9D394 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rufy3Q9D394 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC14.44□□□□□ -0.1
Rufy3Q9D394 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Rufy3Q9D394 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
Rufy3Q9D394 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rufy3Q9D394 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rufy3Q9D394 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rufy3Q9D394 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC14.44□□□□□ -0.1
Rufy3Q9D394 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rufy3Q9D394 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Rufy3Q9D394 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rufy3Q9D394 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rufy3Q9D394 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rufy3Q9D394 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rufy3Q9D394 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rufy3Q9D394 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Rufy3Q9D394 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC14.44□□□□□ -0.1
Rufy3Q9D394 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rufy3Q9D394 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC14.44□□□□□ -0.1
Rufy3Q9D394 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Rufy3Q9D394 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
Rufy3Q9D394 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
Rufy3Q9D394 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Rufy3Q9D394 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
Rufy3Q9D394 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC14.44□□□□□ -0.1
Rufy3Q9D394 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC14.44□□□□□ -0.1
Rufy3Q9D394 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC14.44□□□□□ -0.1
Rufy3Q9D394 AC166095.1-201ENSMUST00000223731 1241 ntBASIC14.44□□□□□ -0.1
Rufy3Q9D394 AC126253.1-202ENSMUST00000226732 835 ntBASIC14.44□□□□□ -0.1
Rufy3Q9D394 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rufy3Q9D394 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 63.5 ms