Protein–RNA interactions for Protein: Q9CWU5

Khdc3, KH domain-containing protein 3, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc3Q9CWU5 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC11.87□□□□□ -0.51
Khdc3Q9CWU5 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Khdc3Q9CWU5 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Khdc3Q9CWU5 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Khdc3Q9CWU5 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Khdc3Q9CWU5 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Khdc3Q9CWU5 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Khdc3Q9CWU5 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Khdc3Q9CWU5 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Khdc3Q9CWU5 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Khdc3Q9CWU5 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Khdc3Q9CWU5 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Khdc3Q9CWU5 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Khdc3Q9CWU5 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Khdc3Q9CWU5 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Khdc3Q9CWU5 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Khdc3Q9CWU5 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Khdc3Q9CWU5 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Khdc3Q9CWU5 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Khdc3Q9CWU5 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Khdc3Q9CWU5 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Khdc3Q9CWU5 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Khdc3Q9CWU5 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Khdc3Q9CWU5 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Khdc3Q9CWU5 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Khdc3Q9CWU5 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Khdc3Q9CWU5 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Khdc3Q9CWU5 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Khdc3Q9CWU5 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Khdc3Q9CWU5 Gm13315-201ENSMUST00000120376 991 ntBASIC11.86□□□□□ -0.51
Khdc3Q9CWU5 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC11.86□□□□□ -0.51
Khdc3Q9CWU5 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC11.86□□□□□ -0.51
Khdc3Q9CWU5 Gm24548-201ENSMUST00000158650 108 ntBASIC11.86□□□□□ -0.51
Khdc3Q9CWU5 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Khdc3Q9CWU5 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC11.86□□□□□ -0.51
Khdc3Q9CWU5 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Khdc3Q9CWU5 Gm9022-201ENSMUST00000182482 992 ntBASIC11.86□□□□□ -0.51
Khdc3Q9CWU5 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Khdc3Q9CWU5 AC154462.2-201ENSMUST00000227519 370 ntBASIC11.86□□□□□ -0.51
Khdc3Q9CWU5 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Khdc3Q9CWU5 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Khdc3Q9CWU5 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Khdc3Q9CWU5 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Khdc3Q9CWU5 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Khdc3Q9CWU5 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Khdc3Q9CWU5 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Khdc3Q9CWU5 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Khdc3Q9CWU5 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Khdc3Q9CWU5 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Khdc3Q9CWU5 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Khdc3Q9CWU5 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Khdc3Q9CWU5 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Khdc3Q9CWU5 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC11.85□□□□□ -0.51
Khdc3Q9CWU5 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Khdc3Q9CWU5 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Khdc3Q9CWU5 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Khdc3Q9CWU5 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC11.85□□□□□ -0.51
Khdc3Q9CWU5 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Khdc3Q9CWU5 Tmod2-201ENSMUST00000064433 9884 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Khdc3Q9CWU5 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Khdc3Q9CWU5 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Khdc3Q9CWU5 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Khdc3Q9CWU5 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Khdc3Q9CWU5 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC11.85□□□□□ -0.51
Khdc3Q9CWU5 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Khdc3Q9CWU5 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Khdc3Q9CWU5 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Khdc3Q9CWU5 Gm5187-201ENSMUST00000117317 991 ntBASIC11.85□□□□□ -0.51
Khdc3Q9CWU5 Gm14127-201ENSMUST00000117906 678 ntBASIC11.85□□□□□ -0.51
Khdc3Q9CWU5 Gm6023-201ENSMUST00000118217 606 ntBASIC11.85□□□□□ -0.51
Khdc3Q9CWU5 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC11.85□□□□□ -0.51
Khdc3Q9CWU5 Gm19184-201ENSMUST00000196798 928 ntBASIC11.85□□□□□ -0.51
Khdc3Q9CWU5 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC11.85□□□□□ -0.51
Khdc3Q9CWU5 Gm44124-201ENSMUST00000204159 472 ntBASIC11.85□□□□□ -0.51
Khdc3Q9CWU5 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC11.85□□□□□ -0.51
Khdc3Q9CWU5 Gm45930-201ENSMUST00000221330 292 ntBASIC11.85□□□□□ -0.51
Khdc3Q9CWU5 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Khdc3Q9CWU5 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Khdc3Q9CWU5 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Khdc3Q9CWU5 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Khdc3Q9CWU5 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Khdc3Q9CWU5 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Khdc3Q9CWU5 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Khdc3Q9CWU5 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Khdc3Q9CWU5 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Khdc3Q9CWU5 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC11.85□□□□□ -0.51
Khdc3Q9CWU5 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Khdc3Q9CWU5 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Khdc3Q9CWU5 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Khdc3Q9CWU5 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Khdc3Q9CWU5 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Khdc3Q9CWU5 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC11.84□□□□□ -0.51
Khdc3Q9CWU5 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Khdc3Q9CWU5 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC11.84□□□□□ -0.51
Khdc3Q9CWU5 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Khdc3Q9CWU5 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Khdc3Q9CWU5 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC11.84□□□□□ -0.51
Khdc3Q9CWU5 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Khdc3Q9CWU5 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Khdc3Q9CWU5 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms