Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC13.86□□□□□ -0.19
Smc1aQ9CU62 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Smc1aQ9CU62 Gm12363-201ENSMUST00000122250 668 ntBASIC13.86□□□□□ -0.19
Smc1aQ9CU62 Mir7221-201ENSMUST00000184009 72 ntBASIC13.86□□□□□ -0.19
Smc1aQ9CU62 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC13.86□□□□□ -0.19
Smc1aQ9CU62 Gm18584-201ENSMUST00000203098 964 ntBASIC13.86□□□□□ -0.19
Smc1aQ9CU62 Mettl6-204ENSMUST00000227595 1027 ntBASIC13.86□□□□□ -0.19
Smc1aQ9CU62 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Smc1aQ9CU62 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Smc1aQ9CU62 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Smc1aQ9CU62 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Smc1aQ9CU62 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Smc1aQ9CU62 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Smc1aQ9CU62 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Smc1aQ9CU62 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Smc1aQ9CU62 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC13.86□□□□□ -0.19
Smc1aQ9CU62 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Smc1aQ9CU62 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Smc1aQ9CU62 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Smc1aQ9CU62 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Smc1aQ9CU62 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Smc1aQ9CU62 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Smc1aQ9CU62 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC13.86□□□□□ -0.19
Smc1aQ9CU62 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Smc1aQ9CU62 AC159195.1-201ENSMUST00000225867 2086 ntBASIC13.86□□□□□ -0.19
Smc1aQ9CU62 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Smc1aQ9CU62 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Smc1aQ9CU62 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Smc1aQ9CU62 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Smc1aQ9CU62 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Smc1aQ9CU62 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC13.85□□□□□ -0.19
Smc1aQ9CU62 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Smc1aQ9CU62 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Smc1aQ9CU62 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Smc1aQ9CU62 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC13.85□□□□□ -0.19
Smc1aQ9CU62 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Smc1aQ9CU62 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Smc1aQ9CU62 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Smc1aQ9CU62 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Smc1aQ9CU62 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC13.85□□□□□ -0.19
Smc1aQ9CU62 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Smc1aQ9CU62 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Smc1aQ9CU62 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Smc1aQ9CU62 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC13.85□□□□□ -0.19
Smc1aQ9CU62 Gm28693-202ENSMUST00000190758 331 ntBASIC13.85□□□□□ -0.19
Smc1aQ9CU62 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Smc1aQ9CU62 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Smc1aQ9CU62 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Smc1aQ9CU62 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Smc1aQ9CU62 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Smc1aQ9CU62 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Smc1aQ9CU62 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Smc1aQ9CU62 Gm37014-201ENSMUST00000194723 2253 ntBASIC13.85□□□□□ -0.19
Smc1aQ9CU62 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Smc1aQ9CU62 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Smc1aQ9CU62 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Smc1aQ9CU62 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Smc1aQ9CU62 AC157950.1-201ENSMUST00000217561 2168 ntBASIC13.85□□□□□ -0.19
Smc1aQ9CU62 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Smc1aQ9CU62 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Smc1aQ9CU62 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
Smc1aQ9CU62 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Smc1aQ9CU62 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC13.84□□□□□ -0.19
Smc1aQ9CU62 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Smc1aQ9CU62 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Smc1aQ9CU62 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC13.84□□□□□ -0.19
Smc1aQ9CU62 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Smc1aQ9CU62 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Smc1aQ9CU62 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Smc1aQ9CU62 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Smc1aQ9CU62 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Smc1aQ9CU62 Gm11222-201ENSMUST00000119005 738 ntBASIC13.84□□□□□ -0.19
Smc1aQ9CU62 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Smc1aQ9CU62 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC13.84□□□□□ -0.19
Smc1aQ9CU62 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Smc1aQ9CU62 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.19
Smc1aQ9CU62 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
Smc1aQ9CU62 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC13.84□□□□□ -0.19
Smc1aQ9CU62 Gm7619-201ENSMUST00000210649 1282 ntBASIC13.84□□□□□ -0.19
Smc1aQ9CU62 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Smc1aQ9CU62 Morn2-202ENSMUST00000227729 656 ntBASIC13.84□□□□□ -0.19
Smc1aQ9CU62 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Smc1aQ9CU62 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Smc1aQ9CU62 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Smc1aQ9CU62 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Smc1aQ9CU62 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Smc1aQ9CU62 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Smc1aQ9CU62 Gm5466-201ENSMUST00000119395 1890 ntBASIC13.84□□□□□ -0.19
Smc1aQ9CU62 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Smc1aQ9CU62 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC13.84□□□□□ -0.19
Smc1aQ9CU62 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Smc1aQ9CU62 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Smc1aQ9CU62 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Smc1aQ9CU62 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Smc1aQ9CU62 Gm18983-201ENSMUST00000222884 2729 ntBASIC13.84□□□□□ -0.19
Smc1aQ9CU62 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Smc1aQ9CU62 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.19
Smc1aQ9CU62 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Smc1aQ9CU62 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Smc1aQ9CU62 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 55.6 ms