Protein–RNA interactions for Protein: Q9CQQ8

Lsm7, U6 snRNA-associated Sm-like protein LSm7, mousemouse

Known RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm7Q9CQQ8 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lsm7Q9CQQ8 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC12.48□□□□□ -0.41
Lsm7Q9CQQ8 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lsm7Q9CQQ8 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lsm7Q9CQQ8 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lsm7Q9CQQ8 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Lsm7Q9CQQ8 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lsm7Q9CQQ8 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lsm7Q9CQQ8 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC12.48□□□□□ -0.41
Lsm7Q9CQQ8 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lsm7Q9CQQ8 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Lsm7Q9CQQ8 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Lsm7Q9CQQ8 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lsm7Q9CQQ8 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lsm7Q9CQQ8 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lsm7Q9CQQ8 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lsm7Q9CQQ8 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Lsm7Q9CQQ8 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lsm7Q9CQQ8 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC12.47□□□□□ -0.41
Lsm7Q9CQQ8 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Lsm7Q9CQQ8 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lsm7Q9CQQ8 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lsm7Q9CQQ8 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lsm7Q9CQQ8 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Lsm7Q9CQQ8 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lsm7Q9CQQ8 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lsm7Q9CQQ8 Gm43721-201ENSMUST00000199677 2313 ntBASIC12.47□□□□□ -0.41
Lsm7Q9CQQ8 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC12.47□□□□□ -0.41
Lsm7Q9CQQ8 Gm11989-201ENSMUST00000117240 672 ntBASIC12.47□□□□□ -0.41
Lsm7Q9CQQ8 Gm11362-201ENSMUST00000118838 850 ntBASIC12.47□□□□□ -0.41
Lsm7Q9CQQ8 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC12.47□□□□□ -0.41
Lsm7Q9CQQ8 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lsm7Q9CQQ8 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
Lsm7Q9CQQ8 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC12.47□□□□□ -0.41
Lsm7Q9CQQ8 Gm27627-201ENSMUST00000183644 150 ntBASIC12.47□□□□□ -0.41
Lsm7Q9CQQ8 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC12.47□□□□□ -0.41
Lsm7Q9CQQ8 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC12.47□□□□□ -0.41
Lsm7Q9CQQ8 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Lsm7Q9CQQ8 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC12.47□□□□□ -0.41
Lsm7Q9CQQ8 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lsm7Q9CQQ8 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lsm7Q9CQQ8 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lsm7Q9CQQ8 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lsm7Q9CQQ8 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC12.47□□□□□ -0.41
Lsm7Q9CQQ8 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
Lsm7Q9CQQ8 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC12.47□□□□□ -0.41
Lsm7Q9CQQ8 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Lsm7Q9CQQ8 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lsm7Q9CQQ8 AC241621.2-201ENSMUST00000223991 2151 ntBASIC12.47□□□□□ -0.41
Lsm7Q9CQQ8 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Lsm7Q9CQQ8 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC12.47□□□□□ -0.41
Lsm7Q9CQQ8 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lsm7Q9CQQ8 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lsm7Q9CQQ8 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lsm7Q9CQQ8 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lsm7Q9CQQ8 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC12.47□□□□□ -0.41
Lsm7Q9CQQ8 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lsm7Q9CQQ8 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC12.47□□□□□ -0.41
Lsm7Q9CQQ8 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lsm7Q9CQQ8 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Lsm7Q9CQQ8 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lsm7Q9CQQ8 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lsm7Q9CQQ8 Ntrk2-209ENSMUST00000225950 2640 ntBASIC12.46□□□□□ -0.41
Lsm7Q9CQQ8 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lsm7Q9CQQ8 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lsm7Q9CQQ8 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Lsm7Q9CQQ8 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lsm7Q9CQQ8 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lsm7Q9CQQ8 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lsm7Q9CQQ8 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lsm7Q9CQQ8 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Lsm7Q9CQQ8 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lsm7Q9CQQ8 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Lsm7Q9CQQ8 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lsm7Q9CQQ8 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Lsm7Q9CQQ8 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC12.46□□□□□ -0.41
Lsm7Q9CQQ8 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lsm7Q9CQQ8 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC12.46□□□□□ -0.41
Lsm7Q9CQQ8 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
Lsm7Q9CQQ8 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.41
Lsm7Q9CQQ8 Gm16505-201ENSMUST00000179981 232 ntBASIC12.46□□□□□ -0.41
Lsm7Q9CQQ8 Gm29615-201ENSMUST00000185371 697 ntBASIC12.46□□□□□ -0.41
Lsm7Q9CQQ8 Gm28224-201ENSMUST00000186078 697 ntBASIC12.46□□□□□ -0.41
Lsm7Q9CQQ8 Gm29001-201ENSMUST00000186177 697 ntBASIC12.46□□□□□ -0.41
Lsm7Q9CQQ8 Gm28292-201ENSMUST00000186593 697 ntBASIC12.46□□□□□ -0.41
Lsm7Q9CQQ8 Gm28101-201ENSMUST00000187608 697 ntBASIC12.46□□□□□ -0.41
Lsm7Q9CQQ8 Gm29076-201ENSMUST00000187689 697 ntBASIC12.46□□□□□ -0.41
Lsm7Q9CQQ8 Gm28302-201ENSMUST00000187931 697 ntBASIC12.46□□□□□ -0.41
Lsm7Q9CQQ8 Gm28646-201ENSMUST00000188220 697 ntBASIC12.46□□□□□ -0.41
Lsm7Q9CQQ8 Gm28205-201ENSMUST00000189177 697 ntBASIC12.46□□□□□ -0.41
Lsm7Q9CQQ8 Gm29032-201ENSMUST00000189797 697 ntBASIC12.46□□□□□ -0.41
Lsm7Q9CQQ8 Gm28695-201ENSMUST00000190300 697 ntBASIC12.46□□□□□ -0.41
Lsm7Q9CQQ8 Gm37448-201ENSMUST00000192795 697 ntBASIC12.46□□□□□ -0.41
Lsm7Q9CQQ8 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lsm7Q9CQQ8 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC12.46□□□□□ -0.41
Lsm7Q9CQQ8 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lsm7Q9CQQ8 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lsm7Q9CQQ8 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lsm7Q9CQQ8 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Lsm7Q9CQQ8 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 100.4 ms