Protein–RNA interactions for Protein: Q9CQC3

Protein C9orf135 homolog, mousemouse

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9CQC3 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Q9CQC3 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Q9CQC3 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Q9CQC3 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Q9CQC3 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Q9CQC3 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Q9CQC3 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Q9CQC3 AC156031.2-201ENSMUST00000213107 3310 ntBASIC12.79□□□□□ -0.36
Q9CQC3 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Q9CQC3 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Q9CQC3 Gm12241-201ENSMUST00000118330 726 ntBASIC12.79□□□□□ -0.36
Q9CQC3 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Q9CQC3 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC12.79□□□□□ -0.36
Q9CQC3 Gm26956-201ENSMUST00000182176 986 ntBASIC12.79□□□□□ -0.36
Q9CQC3 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC12.79□□□□□ -0.36
Q9CQC3 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC12.79□□□□□ -0.36
Q9CQC3 Gm6621-201ENSMUST00000193251 772 ntBASIC12.79□□□□□ -0.36
Q9CQC3 Gm35960-201ENSMUST00000202712 767 ntBASIC12.79□□□□□ -0.36
Q9CQC3 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC12.79□□□□□ -0.36
Q9CQC3 Gm30285-201ENSMUST00000214614 422 ntBASIC12.79□□□□□ -0.36
Q9CQC3 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC12.79□□□□□ -0.36
Q9CQC3 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Q9CQC3 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC12.79□□□□□ -0.36
Q9CQC3 Gm9996-201ENSMUST00000070359 913 ntBASIC12.79□□□□□ -0.36
Q9CQC3 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Q9CQC3 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Q9CQC3 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Q9CQC3 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Q9CQC3 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Q9CQC3 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Q9CQC3 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Q9CQC3 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Q9CQC3 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
Q9CQC3 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Q9CQC3 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Q9CQC3 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Q9CQC3 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Q9CQC3 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Q9CQC3 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Q9CQC3 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Q9CQC3 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Q9CQC3 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Q9CQC3 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Q9CQC3 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Q9CQC3 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC12.78□□□□□ -0.36
Q9CQC3 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Q9CQC3 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Q9CQC3 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Q9CQC3 Rprl1-201ENSMUST00000158050 327 ntBASIC12.78□□□□□ -0.36
Q9CQC3 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Q9CQC3 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
Q9CQC3 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC12.78□□□□□ -0.36
Q9CQC3 Gm18711-201ENSMUST00000199341 750 ntBASIC12.78□□□□□ -0.36
Q9CQC3 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Q9CQC3 Gm43630-201ENSMUST00000201550 776 ntBASIC12.78□□□□□ -0.36
Q9CQC3 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC12.78□□□□□ -0.36
Q9CQC3 Gm9368-201ENSMUST00000219348 831 ntBASIC12.78□□□□□ -0.36
Q9CQC3 Gm8712-201ENSMUST00000221090 701 ntBASIC12.78□□□□□ -0.36
Q9CQC3 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Q9CQC3 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Q9CQC3 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Q9CQC3 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Q9CQC3 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Q9CQC3 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Q9CQC3 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Q9CQC3 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Q9CQC3 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Q9CQC3 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Q9CQC3 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Q9CQC3 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Q9CQC3 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC12.78□□□□□ -0.36
Q9CQC3 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Q9CQC3 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Q9CQC3 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC12.78□□□□□ -0.36
Q9CQC3 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC12.78□□□□□ -0.36
Q9CQC3 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Q9CQC3 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Q9CQC3 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Q9CQC3 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Q9CQC3 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Q9CQC3 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Q9CQC3 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Q9CQC3 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Q9CQC3 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Q9CQC3 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC12.77□□□□□ -0.36
Q9CQC3 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC12.77□□□□□ -0.36
Q9CQC3 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Q9CQC3 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
Q9CQC3 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC12.77□□□□□ -0.37
Q9CQC3 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Q9CQC3 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Q9CQC3 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Q9CQC3 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Q9CQC3 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Q9CQC3 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Q9CQC3 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Q9CQC3 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Q9CQC3 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC12.77□□□□□ -0.37
Q9CQC3 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC12.77□□□□□ -0.37
Q9CQC3 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC12.77□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms