Protein–RNA interactions for Protein: Q9CPV1

Ska1, Spindle and kinetochore-associated protein 1, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska1Q9CPV1 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC11.69□□□□□ -0.54
Ska1Q9CPV1 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Ska1Q9CPV1 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ska1Q9CPV1 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Ska1Q9CPV1 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC11.69□□□□□ -0.54
Ska1Q9CPV1 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Ska1Q9CPV1 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ska1Q9CPV1 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ska1Q9CPV1 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ska1Q9CPV1 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ska1Q9CPV1 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC11.69□□□□□ -0.54
Ska1Q9CPV1 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Ska1Q9CPV1 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Ska1Q9CPV1 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC11.69□□□□□ -0.54
Ska1Q9CPV1 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ska1Q9CPV1 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC11.69□□□□□ -0.54
Ska1Q9CPV1 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Ska1Q9CPV1 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ska1Q9CPV1 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC11.69□□□□□ -0.54
Ska1Q9CPV1 Gm11637-201ENSMUST00000120601 592 ntBASIC11.69□□□□□ -0.54
Ska1Q9CPV1 Gm2231-201ENSMUST00000125661 612 ntBASIC11.69□□□□□ -0.54
Ska1Q9CPV1 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC11.69□□□□□ -0.54
Ska1Q9CPV1 Gm6244-201ENSMUST00000178732 841 ntBASIC11.69□□□□□ -0.54
Ska1Q9CPV1 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC11.69□□□□□ -0.54
Ska1Q9CPV1 AC166051.1-201ENSMUST00000214313 210 ntBASIC11.69□□□□□ -0.54
Ska1Q9CPV1 Gm8598-201ENSMUST00000221184 836 ntBASIC11.69□□□□□ -0.54
Ska1Q9CPV1 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Ska1Q9CPV1 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ska1Q9CPV1 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ska1Q9CPV1 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ska1Q9CPV1 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Ska1Q9CPV1 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ska1Q9CPV1 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Ska1Q9CPV1 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Ska1Q9CPV1 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Ska1Q9CPV1 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC11.69□□□□□ -0.54
Ska1Q9CPV1 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ska1Q9CPV1 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ska1Q9CPV1 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Ska1Q9CPV1 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Ska1Q9CPV1 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ska1Q9CPV1 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Ska1Q9CPV1 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ska1Q9CPV1 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Ska1Q9CPV1 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC11.68□□□□□ -0.54
Ska1Q9CPV1 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ska1Q9CPV1 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ska1Q9CPV1 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Ska1Q9CPV1 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC11.68□□□□□ -0.54
Ska1Q9CPV1 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ska1Q9CPV1 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ska1Q9CPV1 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ska1Q9CPV1 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ska1Q9CPV1 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ska1Q9CPV1 Cog3-203ENSMUST00000227473 4197 ntBASIC11.68□□□□□ -0.54
Ska1Q9CPV1 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Ska1Q9CPV1 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ska1Q9CPV1 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ska1Q9CPV1 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC11.68□□□□□ -0.54
Ska1Q9CPV1 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC11.68□□□□□ -0.54
Ska1Q9CPV1 Gm11814-201ENSMUST00000119515 929 ntBASIC11.68□□□□□ -0.54
Ska1Q9CPV1 Gm15806-201ENSMUST00000120696 955 ntBASIC11.68□□□□□ -0.54
Ska1Q9CPV1 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ska1Q9CPV1 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC11.68□□□□□ -0.54
Ska1Q9CPV1 Proscos-202ENSMUST00000178990 666 ntBASIC11.68□□□□□ -0.54
Ska1Q9CPV1 Gm27892-201ENSMUST00000185017 106 ntBASIC11.68□□□□□ -0.54
Ska1Q9CPV1 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC11.68□□□□□ -0.54
Ska1Q9CPV1 Gm43416-201ENSMUST00000201916 1015 ntBASIC11.68□□□□□ -0.54
Ska1Q9CPV1 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC11.68□□□□□ -0.54
Ska1Q9CPV1 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Ska1Q9CPV1 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ska1Q9CPV1 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ska1Q9CPV1 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ska1Q9CPV1 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC11.68□□□□□ -0.54
Ska1Q9CPV1 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ska1Q9CPV1 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ska1Q9CPV1 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Ska1Q9CPV1 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Ska1Q9CPV1 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC11.68□□□□□ -0.54
Ska1Q9CPV1 CT009713.10-201ENSMUST00000225013 1986 ntBASIC11.68□□□□□ -0.54
Ska1Q9CPV1 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ska1Q9CPV1 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ska1Q9CPV1 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ska1Q9CPV1 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Ska1Q9CPV1 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ska1Q9CPV1 AC126262.1-201ENSMUST00000221802 1904 ntBASIC11.68□□□□□ -0.54
Ska1Q9CPV1 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ska1Q9CPV1 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ska1Q9CPV1 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ska1Q9CPV1 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ska1Q9CPV1 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC11.68□□□□□ -0.54
Ska1Q9CPV1 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ska1Q9CPV1 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ska1Q9CPV1 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Ska1Q9CPV1 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Ska1Q9CPV1 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Ska1Q9CPV1 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ska1Q9CPV1 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Ska1Q9CPV1 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ska1Q9CPV1 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 77.5 ms