Protein–RNA interactions for Protein: Q99PJ1

Pcdh15, Protocadherin-15, mousemouse

Predictions only

Length 1,943 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15Q99PJ1 Gm26647-201ENSMUST00000180816 1255 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdh15Q99PJ1 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdh15Q99PJ1 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdh15Q99PJ1 Cast-212ENSMUST00000223309 1529 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdh15Q99PJ1 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdh15Q99PJ1 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdh15Q99PJ1 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
Pcdh15Q99PJ1 Gm13347-201ENSMUST00000120298 1353 ntBASIC13.62□□□□□ -0.23
Pcdh15Q99PJ1 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdh15Q99PJ1 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Pcdh15Q99PJ1 Etv1-205ENSMUST00000160856 1474 ntTSL 5 BASIC13.61□□□□□ -0.23
Pcdh15Q99PJ1 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdh15Q99PJ1 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdh15Q99PJ1 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdh15Q99PJ1 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdh15Q99PJ1 Map1b-203ENSMUST00000223725 2669 ntBASIC13.61□□□□□ -0.23
Pcdh15Q99PJ1 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdh15Q99PJ1 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdh15Q99PJ1 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC13.61□□□□□ -0.23
Pcdh15Q99PJ1 Vsir-202ENSMUST00000105459 1290 ntTSL 5 BASIC13.61□□□□□ -0.23
Pcdh15Q99PJ1 Zdhhc21-202ENSMUST00000107239 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdh15Q99PJ1 Cbx7-202ENSMUST00000109615 710 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdh15Q99PJ1 Cd55b-202ENSMUST00000119432 986 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdh15Q99PJ1 Gm12274-201ENSMUST00000120062 385 ntBASIC13.61□□□□□ -0.23
Pcdh15Q99PJ1 Slfn5os-201ENSMUST00000127074 574 ntTSL 2 BASIC13.61□□□□□ -0.23
Pcdh15Q99PJ1 Gm13026-201ENSMUST00000140113 608 ntTSL 5 BASIC13.61□□□□□ -0.23
Pcdh15Q99PJ1 Ccndbp1-208ENSMUST00000171260 1187 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Pcdh15Q99PJ1 Plac9a-203ENSMUST00000183725 439 ntTSL 3 BASIC13.61□□□□□ -0.23
Pcdh15Q99PJ1 Plac9b-202ENSMUST00000183811 396 ntTSL 3 BASIC13.61□□□□□ -0.23
Pcdh15Q99PJ1 C630004L07Rik-201ENSMUST00000193236 1275 ntBASIC13.61□□□□□ -0.23
Pcdh15Q99PJ1 Gm5982-201ENSMUST00000196234 512 ntBASIC13.61□□□□□ -0.23
Pcdh15Q99PJ1 AC154305.2-201ENSMUST00000225813 901 ntBASIC13.61□□□□□ -0.23
Pcdh15Q99PJ1 Gm19863-201ENSMUST00000192480 2218 ntBASIC13.61□□□□□ -0.23
Pcdh15Q99PJ1 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Pcdh15Q99PJ1 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdh15Q99PJ1 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdh15Q99PJ1 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Pcdh15Q99PJ1 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdh15Q99PJ1 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdh15Q99PJ1 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdh15Q99PJ1 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdh15Q99PJ1 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Pcdh15Q99PJ1 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdh15Q99PJ1 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdh15Q99PJ1 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdh15Q99PJ1 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdh15Q99PJ1 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdh15Q99PJ1 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdh15Q99PJ1 Gm26632-201ENSMUST00000181120 1400 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdh15Q99PJ1 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdh15Q99PJ1 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Pcdh15Q99PJ1 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdh15Q99PJ1 Tomm5-202ENSMUST00000107808 679 ntTSL 2 BASIC13.6□□□□□ -0.23
Pcdh15Q99PJ1 Mir1905-201ENSMUST00000122779 82 ntBASIC13.6□□□□□ -0.23
Pcdh15Q99PJ1 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC13.6□□□□□ -0.23
Pcdh15Q99PJ1 Nudt12os-201ENSMUST00000145848 939 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdh15Q99PJ1 AC170597.1-201ENSMUST00000221956 440 ntTSL 2 BASIC13.6□□□□□ -0.23
Pcdh15Q99PJ1 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdh15Q99PJ1 4930558J22Rik-201ENSMUST00000139822 1480 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdh15Q99PJ1 Gm2420-201ENSMUST00000119864 2149 ntBASIC13.6□□□□□ -0.23
Pcdh15Q99PJ1 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdh15Q99PJ1 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdh15Q99PJ1 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdh15Q99PJ1 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdh15Q99PJ1 Copz1-201ENSMUST00000100162 1669 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdh15Q99PJ1 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdh15Q99PJ1 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdh15Q99PJ1 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdh15Q99PJ1 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdh15Q99PJ1 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdh15Q99PJ1 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdh15Q99PJ1 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Pcdh15Q99PJ1 Gm44414-201ENSMUST00000203660 2109 ntBASIC13.6□□□□□ -0.23
Pcdh15Q99PJ1 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdh15Q99PJ1 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdh15Q99PJ1 Gcg-201ENSMUST00000102733 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdh15Q99PJ1 Gm16167-201ENSMUST00000160428 1065 ntBASIC13.6□□□□□ -0.23
Pcdh15Q99PJ1 Gm24954-201ENSMUST00000178831 110 ntBASIC13.6□□□□□ -0.23
Pcdh15Q99PJ1 AU020206-201ENSMUST00000181224 656 ntTSL 2 BASIC13.6□□□□□ -0.23
Pcdh15Q99PJ1 Gm42953-201ENSMUST00000199363 581 ntTSL 3 BASIC13.6□□□□□ -0.23
Pcdh15Q99PJ1 Gm5996-201ENSMUST00000211110 718 ntBASIC13.6□□□□□ -0.23
Pcdh15Q99PJ1 Fth1-201ENSMUST00000025563 866 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdh15Q99PJ1 Gm6040-201ENSMUST00000095430 857 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdh15Q99PJ1 Smok4a-201ENSMUST00000074512 1455 ntBASIC13.6□□□□□ -0.23
Pcdh15Q99PJ1 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdh15Q99PJ1 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC13.6□□□□□ -0.23
Pcdh15Q99PJ1 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdh15Q99PJ1 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Pcdh15Q99PJ1 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC13.59□□□□□ -0.23
Pcdh15Q99PJ1 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdh15Q99PJ1 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC13.59□□□□□ -0.23
Pcdh15Q99PJ1 Gm9796-201ENSMUST00000062249 2250 ntBASIC13.59□□□□□ -0.23
Pcdh15Q99PJ1 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdh15Q99PJ1 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdh15Q99PJ1 Gm45218-201ENSMUST00000205533 1678 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdh15Q99PJ1 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Pcdh15Q99PJ1 4921524J17Rik-201ENSMUST00000047749 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdh15Q99PJ1 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC13.59□□□□□ -0.23
Pcdh15Q99PJ1 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdh15Q99PJ1 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms