Protein–RNA interactions for Protein: Q99MB1

Tlr3, Toll-like receptor 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlr3Q99MB1 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tlr3Q99MB1 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tlr3Q99MB1 Gm2673-201ENSMUST00000120958 1608 ntBASIC13.28□□□□□ -0.28
Tlr3Q99MB1 Gm37472-201ENSMUST00000192342 4052 ntBASIC13.28□□□□□ -0.28
Tlr3Q99MB1 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tlr3Q99MB1 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tlr3Q99MB1 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Tlr3Q99MB1 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.28
Tlr3Q99MB1 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Tlr3Q99MB1 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Tlr3Q99MB1 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Tlr3Q99MB1 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Tlr3Q99MB1 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Tlr3Q99MB1 CT009757.3-201ENSMUST00000223367 2320 ntBASIC13.27□□□□□ -0.28
Tlr3Q99MB1 Gm22323-201ENSMUST00000103832 109 ntBASIC13.27□□□□□ -0.29
Tlr3Q99MB1 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Tlr3Q99MB1 Gm13570-201ENSMUST00000140763 309 ntBASIC13.27□□□□□ -0.29
Tlr3Q99MB1 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Tlr3Q99MB1 Gm2383-201ENSMUST00000181461 807 ntBASIC13.27□□□□□ -0.29
Tlr3Q99MB1 Gm5597-201ENSMUST00000182353 1193 ntBASIC13.27□□□□□ -0.29
Tlr3Q99MB1 Gm44487-201ENSMUST00000205145 325 ntBASIC13.27□□□□□ -0.29
Tlr3Q99MB1 Gm44882-201ENSMUST00000205702 802 ntBASIC13.27□□□□□ -0.29
Tlr3Q99MB1 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC13.27□□□□□ -0.29
Tlr3Q99MB1 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Tlr3Q99MB1 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Tlr3Q99MB1 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Tlr3Q99MB1 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Tlr3Q99MB1 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Tlr3Q99MB1 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Tlr3Q99MB1 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Tlr3Q99MB1 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Tlr3Q99MB1 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Tlr3Q99MB1 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Tlr3Q99MB1 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC13.27□□□□□ -0.29
Tlr3Q99MB1 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Tlr3Q99MB1 AC160405.1-201ENSMUST00000218207 1545 ntBASIC13.27□□□□□ -0.29
Tlr3Q99MB1 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Tlr3Q99MB1 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Tlr3Q99MB1 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Tlr3Q99MB1 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Tlr3Q99MB1 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Tlr3Q99MB1 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Tlr3Q99MB1 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Tlr3Q99MB1 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Tlr3Q99MB1 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Tlr3Q99MB1 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Tlr3Q99MB1 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Tlr3Q99MB1 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Tlr3Q99MB1 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Tlr3Q99MB1 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Tlr3Q99MB1 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Tlr3Q99MB1 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC13.26□□□□□ -0.29
Tlr3Q99MB1 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC13.26□□□□□ -0.29
Tlr3Q99MB1 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Tlr3Q99MB1 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC13.26□□□□□ -0.29
Tlr3Q99MB1 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Tlr3Q99MB1 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Tlr3Q99MB1 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Tlr3Q99MB1 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC13.26□□□□□ -0.29
Tlr3Q99MB1 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC13.26□□□□□ -0.29
Tlr3Q99MB1 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC13.26□□□□□ -0.29
Tlr3Q99MB1 Gm21769-201ENSMUST00000211922 111 ntBASIC13.26□□□□□ -0.29
Tlr3Q99MB1 AC153974.2-201ENSMUST00000218577 1025 ntBASIC13.26□□□□□ -0.29
Tlr3Q99MB1 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Tlr3Q99MB1 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Tlr3Q99MB1 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Tlr3Q99MB1 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Tlr3Q99MB1 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Tlr3Q99MB1 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Tlr3Q99MB1 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Tlr3Q99MB1 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Tlr3Q99MB1 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Tlr3Q99MB1 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Tlr3Q99MB1 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Tlr3Q99MB1 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Tlr3Q99MB1 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC13.25□□□□□ -0.29
Tlr3Q99MB1 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
Tlr3Q99MB1 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Tlr3Q99MB1 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC13.25□□□□□ -0.29
Tlr3Q99MB1 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Tlr3Q99MB1 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Tlr3Q99MB1 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC13.25□□□□□ -0.29
Tlr3Q99MB1 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Tlr3Q99MB1 Gm27177-202ENSMUST00000183514 2703 ntBASIC13.25□□□□□ -0.29
Tlr3Q99MB1 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Tlr3Q99MB1 Gm2606-201ENSMUST00000100754 1002 ntBASIC13.25□□□□□ -0.29
Tlr3Q99MB1 Gm12286-201ENSMUST00000119246 1002 ntBASIC13.25□□□□□ -0.29
Tlr3Q99MB1 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC13.25□□□□□ -0.29
Tlr3Q99MB1 Gm5363-201ENSMUST00000211927 938 ntBASIC13.25□□□□□ -0.29
Tlr3Q99MB1 Morn2-202ENSMUST00000227729 656 ntBASIC13.25□□□□□ -0.29
Tlr3Q99MB1 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Tlr3Q99MB1 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Tlr3Q99MB1 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Tlr3Q99MB1 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Tlr3Q99MB1 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Tlr3Q99MB1 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Tlr3Q99MB1 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
Tlr3Q99MB1 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Tlr3Q99MB1 Gm7224-201ENSMUST00000121359 2066 ntBASIC13.25□□□□□ -0.29
Tlr3Q99MB1 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC13.25□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms