Protein–RNA interactions for Protein: Q99LU0

Chmp1b1, Charged multivesicular body protein 1b-1, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1b1Q99LU0 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Chmp1b1Q99LU0 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
Chmp1b1Q99LU0 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC11.71□□□□□ -0.54
Chmp1b1Q99LU0 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Chmp1b1Q99LU0 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Chmp1b1Q99LU0 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC11.71□□□□□ -0.54
Chmp1b1Q99LU0 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Chmp1b1Q99LU0 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Chmp1b1Q99LU0 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Chmp1b1Q99LU0 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Chmp1b1Q99LU0 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Chmp1b1Q99LU0 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Chmp1b1Q99LU0 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC11.7□□□□□ -0.54
Chmp1b1Q99LU0 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Chmp1b1Q99LU0 D130051D11Rik-201ENSMUST00000189171 6188 ntBASIC11.7□□□□□ -0.54
Chmp1b1Q99LU0 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Chmp1b1Q99LU0 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Chmp1b1Q99LU0 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Chmp1b1Q99LU0 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC11.7□□□□□ -0.54
Chmp1b1Q99LU0 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Chmp1b1Q99LU0 AC154262.2-202ENSMUST00000225158 1331 ntBASIC11.7□□□□□ -0.54
Chmp1b1Q99LU0 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Chmp1b1Q99LU0 App-206ENSMUST00000227723 8167 ntAPPRIS ALT2 BASIC11.7□□□□□ -0.54
Chmp1b1Q99LU0 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Chmp1b1Q99LU0 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC11.7□□□□□ -0.54
Chmp1b1Q99LU0 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Chmp1b1Q99LU0 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
Chmp1b1Q99LU0 Mir1938-201ENSMUST00000158746 100 ntBASIC11.7□□□□□ -0.54
Chmp1b1Q99LU0 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Chmp1b1Q99LU0 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC11.7□□□□□ -0.54
Chmp1b1Q99LU0 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Chmp1b1Q99LU0 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC11.7□□□□□ -0.54
Chmp1b1Q99LU0 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC11.7□□□□□ -0.54
Chmp1b1Q99LU0 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC11.7□□□□□ -0.54
Chmp1b1Q99LU0 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC11.7□□□□□ -0.54
Chmp1b1Q99LU0 AC125350.2-201ENSMUST00000224737 727 ntBASIC11.7□□□□□ -0.54
Chmp1b1Q99LU0 AC140451.2-201ENSMUST00000228030 664 ntBASIC11.7□□□□□ -0.54
Chmp1b1Q99LU0 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Chmp1b1Q99LU0 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Chmp1b1Q99LU0 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Chmp1b1Q99LU0 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Chmp1b1Q99LU0 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Chmp1b1Q99LU0 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC11.7□□□□□ -0.54
Chmp1b1Q99LU0 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Chmp1b1Q99LU0 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Chmp1b1Q99LU0 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Chmp1b1Q99LU0 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Chmp1b1Q99LU0 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Chmp1b1Q99LU0 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Chmp1b1Q99LU0 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC11.7□□□□□ -0.54
Chmp1b1Q99LU0 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Chmp1b1Q99LU0 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Chmp1b1Q99LU0 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Chmp1b1Q99LU0 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Chmp1b1Q99LU0 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Chmp1b1Q99LU0 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC11.7□□□□□ -0.54
Chmp1b1Q99LU0 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Chmp1b1Q99LU0 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Chmp1b1Q99LU0 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Chmp1b1Q99LU0 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Chmp1b1Q99LU0 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Chmp1b1Q99LU0 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Chmp1b1Q99LU0 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Chmp1b1Q99LU0 Ntrk2-201ENSMUST00000079828 8744 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Chmp1b1Q99LU0 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Chmp1b1Q99LU0 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Chmp1b1Q99LU0 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Chmp1b1Q99LU0 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Chmp1b1Q99LU0 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Chmp1b1Q99LU0 Akap12-202ENSMUST00000215696 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Chmp1b1Q99LU0 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Chmp1b1Q99LU0 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Chmp1b1Q99LU0 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Chmp1b1Q99LU0 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Chmp1b1Q99LU0 Gm26811-201ENSMUST00000181258 5485 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Chmp1b1Q99LU0 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Chmp1b1Q99LU0 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Chmp1b1Q99LU0 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Chmp1b1Q99LU0 Gm13492-201ENSMUST00000119772 665 ntBASIC11.69□□□□□ -0.54
Chmp1b1Q99LU0 Gm12502-201ENSMUST00000120197 444 ntBASIC11.69□□□□□ -0.54
Chmp1b1Q99LU0 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC11.69□□□□□ -0.54
Chmp1b1Q99LU0 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Chmp1b1Q99LU0 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
Chmp1b1Q99LU0 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Chmp1b1Q99LU0 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Chmp1b1Q99LU0 Gm32025-201ENSMUST00000217960 307 ntBASIC11.69□□□□□ -0.54
Chmp1b1Q99LU0 Tyms-ps-201ENSMUST00000219550 915 ntBASIC11.69□□□□□ -0.54
Chmp1b1Q99LU0 Gm9899-201ENSMUST00000065519 555 ntBASIC11.69□□□□□ -0.54
Chmp1b1Q99LU0 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Chmp1b1Q99LU0 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Chmp1b1Q99LU0 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Chmp1b1Q99LU0 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Chmp1b1Q99LU0 Gatsl2-201ENSMUST00000016088 7367 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Chmp1b1Q99LU0 Dctn4-202ENSMUST00000223590 1530 ntBASIC11.69□□□□□ -0.54
Chmp1b1Q99LU0 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Chmp1b1Q99LU0 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Chmp1b1Q99LU0 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC11.69□□□□□ -0.54
Chmp1b1Q99LU0 Ankrd31-203ENSMUST00000208758 5859 ntTSL 5 BASIC11.69□□□□□ -0.54
Chmp1b1Q99LU0 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Chmp1b1Q99LU0 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms