Protein–RNA interactions for Protein: Q99LI2

Clcc1, Chloride channel CLIC-like protein 1, mousemouse

Predictions only

Length 539 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcc1Q99LI2 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Clcc1Q99LI2 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
Clcc1Q99LI2 Gm9630-201ENSMUST00000178304 885 ntBASIC12.23□□□□□ -0.45
Clcc1Q99LI2 Gm28450-201ENSMUST00000187349 638 ntBASIC12.23□□□□□ -0.45
Clcc1Q99LI2 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Clcc1Q99LI2 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Clcc1Q99LI2 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Clcc1Q99LI2 Gm45691-201ENSMUST00000206905 1120 ntBASIC12.23□□□□□ -0.45
Clcc1Q99LI2 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC12.23□□□□□ -0.45
Clcc1Q99LI2 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC12.23□□□□□ -0.45
Clcc1Q99LI2 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC12.23□□□□□ -0.45
Clcc1Q99LI2 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Clcc1Q99LI2 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Clcc1Q99LI2 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Clcc1Q99LI2 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Clcc1Q99LI2 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Clcc1Q99LI2 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Clcc1Q99LI2 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Clcc1Q99LI2 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Clcc1Q99LI2 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Clcc1Q99LI2 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Clcc1Q99LI2 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC12.22□□□□□ -0.45
Clcc1Q99LI2 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Clcc1Q99LI2 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Clcc1Q99LI2 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Clcc1Q99LI2 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC12.22□□□□□ -0.45
Clcc1Q99LI2 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Clcc1Q99LI2 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Clcc1Q99LI2 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Clcc1Q99LI2 Gm9333-201ENSMUST00000205452 1323 ntBASIC12.22□□□□□ -0.45
Clcc1Q99LI2 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Clcc1Q99LI2 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Clcc1Q99LI2 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Clcc1Q99LI2 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Clcc1Q99LI2 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC12.22□□□□□ -0.45
Clcc1Q99LI2 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Clcc1Q99LI2 Gm13296-201ENSMUST00000117854 997 ntBASIC12.22□□□□□ -0.45
Clcc1Q99LI2 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC12.22□□□□□ -0.45
Clcc1Q99LI2 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Clcc1Q99LI2 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC12.22□□□□□ -0.45
Clcc1Q99LI2 Mir6979-201ENSMUST00000183927 56 ntBASIC12.22□□□□□ -0.45
Clcc1Q99LI2 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC12.22□□□□□ -0.45
Clcc1Q99LI2 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Clcc1Q99LI2 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC12.22□□□□□ -0.45
Clcc1Q99LI2 Gm43138-201ENSMUST00000199123 708 ntBASIC12.22□□□□□ -0.45
Clcc1Q99LI2 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Clcc1Q99LI2 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC12.22□□□□□ -0.45
Clcc1Q99LI2 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC12.22□□□□□ -0.45
Clcc1Q99LI2 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC12.22□□□□□ -0.45
Clcc1Q99LI2 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Clcc1Q99LI2 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Clcc1Q99LI2 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Clcc1Q99LI2 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Clcc1Q99LI2 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Clcc1Q99LI2 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Clcc1Q99LI2 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Clcc1Q99LI2 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Clcc1Q99LI2 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Clcc1Q99LI2 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Clcc1Q99LI2 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Clcc1Q99LI2 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Clcc1Q99LI2 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Clcc1Q99LI2 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Clcc1Q99LI2 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Clcc1Q99LI2 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Clcc1Q99LI2 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Clcc1Q99LI2 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Clcc1Q99LI2 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Clcc1Q99LI2 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Clcc1Q99LI2 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Clcc1Q99LI2 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Clcc1Q99LI2 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Clcc1Q99LI2 Ntrk2-204ENSMUST00000224259 3049 ntBASIC12.21□□□□□ -0.45
Clcc1Q99LI2 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Clcc1Q99LI2 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC12.21□□□□□ -0.45
Clcc1Q99LI2 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Clcc1Q99LI2 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Clcc1Q99LI2 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Clcc1Q99LI2 Gm6963-201ENSMUST00000147879 379 ntBASIC12.21□□□□□ -0.45
Clcc1Q99LI2 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC12.21□□□□□ -0.45
Clcc1Q99LI2 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Clcc1Q99LI2 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Clcc1Q99LI2 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC12.21□□□□□ -0.45
Clcc1Q99LI2 Gm42937-201ENSMUST00000197360 752 ntBASIC12.21□□□□□ -0.45
Clcc1Q99LI2 Rprl1-202ENSMUST00000198476 238 ntBASIC12.21□□□□□ -0.45
Clcc1Q99LI2 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Clcc1Q99LI2 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC12.21□□□□□ -0.45
Clcc1Q99LI2 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Clcc1Q99LI2 Gm19208-201ENSMUST00000213861 912 ntBASIC12.21□□□□□ -0.45
Clcc1Q99LI2 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Clcc1Q99LI2 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Clcc1Q99LI2 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC12.21□□□□□ -0.45
Clcc1Q99LI2 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.45
Clcc1Q99LI2 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.45
Clcc1Q99LI2 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Clcc1Q99LI2 Gm44942-201ENSMUST00000096093 2072 ntBASIC12.21□□□□□ -0.45
Clcc1Q99LI2 AC122197.2-201ENSMUST00000219196 1635 ntBASIC12.21□□□□□ -0.46
Clcc1Q99LI2 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.46
Clcc1Q99LI2 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Clcc1Q99LI2 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 54.4 ms