Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RtcbQ99LF4 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
RtcbQ99LF4 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RtcbQ99LF4 4930486L24Rik-201ENSMUST00000091569 1432 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RtcbQ99LF4 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RtcbQ99LF4 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
RtcbQ99LF4 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RtcbQ99LF4 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
RtcbQ99LF4 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RtcbQ99LF4 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RtcbQ99LF4 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC15.19■□□□□ 0.02
RtcbQ99LF4 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RtcbQ99LF4 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC15.19■□□□□ 0.02
RtcbQ99LF4 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC15.19■□□□□ 0.02
RtcbQ99LF4 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RtcbQ99LF4 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RtcbQ99LF4 n-R5s64-201ENSMUST00000102019 119 ntBASIC15.19■□□□□ 0.02
RtcbQ99LF4 Gm22920-201ENSMUST00000102175 109 ntBASIC15.19■□□□□ 0.02
RtcbQ99LF4 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
RtcbQ99LF4 Gm12628-201ENSMUST00000122193 382 ntBASIC15.19■□□□□ 0.02
RtcbQ99LF4 Gm14091-201ENSMUST00000133534 874 ntTSL 2 BASIC15.19■□□□□ 0.02
RtcbQ99LF4 Gm8815-201ENSMUST00000173809 620 ntBASIC15.19■□□□□ 0.02
RtcbQ99LF4 Gm10731-201ENSMUST00000181171 448 ntBASIC15.19■□□□□ 0.02
RtcbQ99LF4 4930405N21Rik-201ENSMUST00000199950 1200 ntBASIC15.19■□□□□ 0.02
RtcbQ99LF4 6430531B16Rik-204ENSMUST00000209335 898 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
RtcbQ99LF4 Gm45338-204ENSMUST00000210658 1105 ntTSL 5 BASIC15.19■□□□□ 0.02
RtcbQ99LF4 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC15.19■□□□□ 0.02
RtcbQ99LF4 Gm6867-201ENSMUST00000219165 425 ntBASIC15.19■□□□□ 0.02
RtcbQ99LF4 AC154184.3-201ENSMUST00000225620 1090 ntBASIC15.19■□□□□ 0.02
RtcbQ99LF4 Olfr284-201ENSMUST00000063289 918 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
RtcbQ99LF4 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RtcbQ99LF4 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RtcbQ99LF4 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
RtcbQ99LF4 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RtcbQ99LF4 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RtcbQ99LF4 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
RtcbQ99LF4 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
RtcbQ99LF4 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RtcbQ99LF4 Gm43267-201ENSMUST00000199664 1796 ntBASIC15.19■□□□□ 0.02
RtcbQ99LF4 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
RtcbQ99LF4 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC15.18■□□□□ 0.02
RtcbQ99LF4 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RtcbQ99LF4 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RtcbQ99LF4 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RtcbQ99LF4 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC15.18■□□□□ 0.02
RtcbQ99LF4 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RtcbQ99LF4 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RtcbQ99LF4 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RtcbQ99LF4 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RtcbQ99LF4 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RtcbQ99LF4 Gm23912-201ENSMUST00000104687 87 ntBASIC15.18■□□□□ 0.02
RtcbQ99LF4 Agbl3-201ENSMUST00000115009 806 ntTSL 5 BASIC15.18■□□□□ 0.02
RtcbQ99LF4 Gm13916-201ENSMUST00000117368 628 ntBASIC15.18■□□□□ 0.02
RtcbQ99LF4 Gm6408-201ENSMUST00000179032 1171 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
RtcbQ99LF4 Gm28388-201ENSMUST00000186262 437 ntBASIC15.18■□□□□ 0.02
RtcbQ99LF4 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC15.18■□□□□ 0.02
RtcbQ99LF4 Gm44711-201ENSMUST00000205414 1264 ntBASIC15.18■□□□□ 0.02
RtcbQ99LF4 Gm2875-201ENSMUST00000211333 360 ntBASIC15.18■□□□□ 0.02
RtcbQ99LF4 AC153937.1-201ENSMUST00000218734 412 ntBASIC15.18■□□□□ 0.02
RtcbQ99LF4 AC154257.1-202ENSMUST00000224729 843 ntBASIC15.18■□□□□ 0.02
RtcbQ99LF4 Scg5-201ENSMUST00000024005 1208 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RtcbQ99LF4 Nudt2-201ENSMUST00000030154 845 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RtcbQ99LF4 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
RtcbQ99LF4 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
RtcbQ99LF4 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RtcbQ99LF4 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RtcbQ99LF4 AC166491.1-201ENSMUST00000227053 2308 ntBASIC15.18■□□□□ 0.02
RtcbQ99LF4 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RtcbQ99LF4 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RtcbQ99LF4 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RtcbQ99LF4 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RtcbQ99LF4 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RtcbQ99LF4 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RtcbQ99LF4 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RtcbQ99LF4 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
RtcbQ99LF4 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RtcbQ99LF4 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RtcbQ99LF4 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
RtcbQ99LF4 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC15.18■□□□□ 0.02
RtcbQ99LF4 Gm7537-201ENSMUST00000221660 1414 ntBASIC15.17■□□□□ 0.02
RtcbQ99LF4 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC15.17■□□□□ 0.02
RtcbQ99LF4 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
RtcbQ99LF4 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
RtcbQ99LF4 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
RtcbQ99LF4 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RtcbQ99LF4 Gm19863-201ENSMUST00000192480 2218 ntBASIC15.17■□□□□ 0.02
RtcbQ99LF4 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RtcbQ99LF4 Gm30238-201ENSMUST00000195528 2603 ntBASIC15.17■□□□□ 0.02
RtcbQ99LF4 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RtcbQ99LF4 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RtcbQ99LF4 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RtcbQ99LF4 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RtcbQ99LF4 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
RtcbQ99LF4 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RtcbQ99LF4 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
RtcbQ99LF4 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RtcbQ99LF4 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RtcbQ99LF4 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
RtcbQ99LF4 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RtcbQ99LF4 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 74.5 ms