Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdha3Q91Y16 Gm4366-201ENSMUST00000201488 1342 ntBASIC12.94□□□□□ -0.34
Pcdha3Q91Y16 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC12.94□□□□□ -0.34
Pcdha3Q91Y16 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdha3Q91Y16 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdha3Q91Y16 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdha3Q91Y16 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdha3Q91Y16 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdha3Q91Y16 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdha3Q91Y16 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdha3Q91Y16 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdha3Q91Y16 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdha3Q91Y16 Gm19221-201ENSMUST00000221827 1477 ntBASIC12.94□□□□□ -0.34
Pcdha3Q91Y16 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC12.94□□□□□ -0.34
Pcdha3Q91Y16 Gm13736-201ENSMUST00000119272 253 ntBASIC12.94□□□□□ -0.34
Pcdha3Q91Y16 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC12.94□□□□□ -0.34
Pcdha3Q91Y16 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC12.94□□□□□ -0.34
Pcdha3Q91Y16 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdha3Q91Y16 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdha3Q91Y16 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC12.94□□□□□ -0.34
Pcdha3Q91Y16 Gm2546-201ENSMUST00000182630 991 ntBASIC12.94□□□□□ -0.34
Pcdha3Q91Y16 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdha3Q91Y16 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC12.94□□□□□ -0.34
Pcdha3Q91Y16 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC12.94□□□□□ -0.34
Pcdha3Q91Y16 Gm37201-201ENSMUST00000191845 523 ntBASIC12.94□□□□□ -0.34
Pcdha3Q91Y16 Gm6621-201ENSMUST00000193251 772 ntBASIC12.94□□□□□ -0.34
Pcdha3Q91Y16 Gm19963-201ENSMUST00000208413 1255 ntBASIC12.94□□□□□ -0.34
Pcdha3Q91Y16 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC12.94□□□□□ -0.34
Pcdha3Q91Y16 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC12.94□□□□□ -0.34
Pcdha3Q91Y16 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC12.94□□□□□ -0.34
Pcdha3Q91Y16 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdha3Q91Y16 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdha3Q91Y16 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdha3Q91Y16 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Pcdha3Q91Y16 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Pcdha3Q91Y16 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdha3Q91Y16 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdha3Q91Y16 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdha3Q91Y16 Gm43823-201ENSMUST00000197391 1808 ntBASIC12.94□□□□□ -0.34
Pcdha3Q91Y16 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdha3Q91Y16 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdha3Q91Y16 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdha3Q91Y16 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdha3Q91Y16 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Pcdha3Q91Y16 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Pcdha3Q91Y16 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdha3Q91Y16 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdha3Q91Y16 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdha3Q91Y16 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdha3Q91Y16 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdha3Q91Y16 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdha3Q91Y16 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdha3Q91Y16 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC12.93□□□□□ -0.34
Pcdha3Q91Y16 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
Pcdha3Q91Y16 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdha3Q91Y16 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC12.93□□□□□ -0.34
Pcdha3Q91Y16 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdha3Q91Y16 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdha3Q91Y16 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdha3Q91Y16 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC12.93□□□□□ -0.34
Pcdha3Q91Y16 Gm14381-201ENSMUST00000122105 414 ntBASIC12.93□□□□□ -0.34
Pcdha3Q91Y16 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Pcdha3Q91Y16 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC12.93□□□□□ -0.34
Pcdha3Q91Y16 Gm38319-201ENSMUST00000194537 1266 ntBASIC12.93□□□□□ -0.34
Pcdha3Q91Y16 Gm38341-201ENSMUST00000195357 515 ntBASIC12.93□□□□□ -0.34
Pcdha3Q91Y16 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC12.93□□□□□ -0.34
Pcdha3Q91Y16 Gm6334-201ENSMUST00000207083 228 ntBASIC12.93□□□□□ -0.34
Pcdha3Q91Y16 Gm45865-201ENSMUST00000211815 945 ntBASIC12.93□□□□□ -0.34
Pcdha3Q91Y16 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdha3Q91Y16 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdha3Q91Y16 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC12.93□□□□□ -0.34
Pcdha3Q91Y16 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdha3Q91Y16 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdha3Q91Y16 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC12.93□□□□□ -0.34
Pcdha3Q91Y16 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC12.93□□□□□ -0.34
Pcdha3Q91Y16 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC12.93□□□□□ -0.34
Pcdha3Q91Y16 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdha3Q91Y16 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdha3Q91Y16 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdha3Q91Y16 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC12.92□□□□□ -0.34
Pcdha3Q91Y16 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdha3Q91Y16 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdha3Q91Y16 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdha3Q91Y16 Gm37737-201ENSMUST00000195013 1638 ntBASIC12.92□□□□□ -0.34
Pcdha3Q91Y16 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdha3Q91Y16 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdha3Q91Y16 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Pcdha3Q91Y16 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC12.92□□□□□ -0.34
Pcdha3Q91Y16 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdha3Q91Y16 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdha3Q91Y16 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdha3Q91Y16 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC12.92□□□□□ -0.34
Pcdha3Q91Y16 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Pcdha3Q91Y16 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdha3Q91Y16 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdha3Q91Y16 Rmrp-201ENSMUST00000157463 271 ntBASIC12.92□□□□□ -0.34
Pcdha3Q91Y16 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdha3Q91Y16 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC12.92□□□□□ -0.34
Pcdha3Q91Y16 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC12.92□□□□□ -0.34
Pcdha3Q91Y16 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC12.92□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms