Protein–RNA interactions for Protein: Q91Y12

Pcdha8, Protocadherin alpha 8, mousemouse

Predictions only

Length 946 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha8Q91Y12 AC125350.2-201ENSMUST00000224737 727 ntBASIC12.05□□□□□ -0.48
Pcdha8Q91Y12 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdha8Q91Y12 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Pcdha8Q91Y12 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdha8Q91Y12 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdha8Q91Y12 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdha8Q91Y12 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdha8Q91Y12 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdha8Q91Y12 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Pcdha8Q91Y12 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Pcdha8Q91Y12 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdha8Q91Y12 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC12.05□□□□□ -0.48
Pcdha8Q91Y12 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdha8Q91Y12 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdha8Q91Y12 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdha8Q91Y12 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdha8Q91Y12 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC12.04□□□□□ -0.48
Pcdha8Q91Y12 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdha8Q91Y12 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdha8Q91Y12 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC12.04□□□□□ -0.48
Pcdha8Q91Y12 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdha8Q91Y12 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdha8Q91Y12 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdha8Q91Y12 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdha8Q91Y12 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdha8Q91Y12 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdha8Q91Y12 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdha8Q91Y12 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Pcdha8Q91Y12 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdha8Q91Y12 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdha8Q91Y12 Trav4d-2-201ENSMUST00000120914 335 ntBASIC12.04□□□□□ -0.48
Pcdha8Q91Y12 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC12.04□□□□□ -0.48
Pcdha8Q91Y12 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Pcdha8Q91Y12 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdha8Q91Y12 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdha8Q91Y12 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdha8Q91Y12 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdha8Q91Y12 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdha8Q91Y12 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdha8Q91Y12 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdha8Q91Y12 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC12.04□□□□□ -0.48
Pcdha8Q91Y12 Gm7224-201ENSMUST00000121359 2066 ntBASIC12.04□□□□□ -0.48
Pcdha8Q91Y12 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdha8Q91Y12 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdha8Q91Y12 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC12.04□□□□□ -0.48
Pcdha8Q91Y12 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdha8Q91Y12 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdha8Q91Y12 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Pcdha8Q91Y12 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdha8Q91Y12 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdha8Q91Y12 AC122860.2-201ENSMUST00000217967 2671 ntBASIC12.04□□□□□ -0.48
Pcdha8Q91Y12 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdha8Q91Y12 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdha8Q91Y12 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC12.03□□□□□ -0.48
Pcdha8Q91Y12 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdha8Q91Y12 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdha8Q91Y12 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdha8Q91Y12 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdha8Q91Y12 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdha8Q91Y12 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdha8Q91Y12 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdha8Q91Y12 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Pcdha8Q91Y12 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdha8Q91Y12 Gm23931-201ENSMUST00000103842 109 ntBASIC12.03□□□□□ -0.48
Pcdha8Q91Y12 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdha8Q91Y12 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Pcdha8Q91Y12 Gm12329-201ENSMUST00000120829 1007 ntBASIC12.03□□□□□ -0.48
Pcdha8Q91Y12 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC12.03□□□□□ -0.48
Pcdha8Q91Y12 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC12.03□□□□□ -0.48
Pcdha8Q91Y12 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC12.03□□□□□ -0.48
Pcdha8Q91Y12 Mir7085-201ENSMUST00000184353 66 ntBASIC12.03□□□□□ -0.48
Pcdha8Q91Y12 Gm44405-201ENSMUST00000198952 126 ntBASIC12.03□□□□□ -0.48
Pcdha8Q91Y12 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
Pcdha8Q91Y12 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdha8Q91Y12 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC12.03□□□□□ -0.48
Pcdha8Q91Y12 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC12.03□□□□□ -0.48
Pcdha8Q91Y12 CT025678.1-201ENSMUST00000214795 2972 ntBASIC12.03□□□□□ -0.48
Pcdha8Q91Y12 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdha8Q91Y12 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC12.03□□□□□ -0.48
Pcdha8Q91Y12 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdha8Q91Y12 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdha8Q91Y12 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdha8Q91Y12 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdha8Q91Y12 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Pcdha8Q91Y12 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdha8Q91Y12 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdha8Q91Y12 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdha8Q91Y12 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdha8Q91Y12 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdha8Q91Y12 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdha8Q91Y12 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdha8Q91Y12 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Pcdha8Q91Y12 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdha8Q91Y12 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC12.03□□□□□ -0.48
Pcdha8Q91Y12 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdha8Q91Y12 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdha8Q91Y12 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Pcdha8Q91Y12 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Pcdha8Q91Y12 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC12.02□□□□□ -0.48
Pcdha8Q91Y12 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 60.6 ms