Protein–RNA interactions for Protein: Q91XY5

Pcdhga3, Protocadherin gamma A3, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga3Q91XY5 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Pcdhga3Q91XY5 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Pcdhga3Q91XY5 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Pcdhga3Q91XY5 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Pcdhga3Q91XY5 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Pcdhga3Q91XY5 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Pcdhga3Q91XY5 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Pcdhga3Q91XY5 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Pcdhga3Q91XY5 Gm24526-201ENSMUST00000082921 158 ntBASIC11.05□□□□□ -0.64
Pcdhga3Q91XY5 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Pcdhga3Q91XY5 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Pcdhga3Q91XY5 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Pcdhga3Q91XY5 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Pcdhga3Q91XY5 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Pcdhga3Q91XY5 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC11.05□□□□□ -0.64
Pcdhga3Q91XY5 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Pcdhga3Q91XY5 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Pcdhga3Q91XY5 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Pcdhga3Q91XY5 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC11.05□□□□□ -0.64
Pcdhga3Q91XY5 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Pcdhga3Q91XY5 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Pcdhga3Q91XY5 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Pcdhga3Q91XY5 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Pcdhga3Q91XY5 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Pcdhga3Q91XY5 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Pcdhga3Q91XY5 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Pcdhga3Q91XY5 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Pcdhga3Q91XY5 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Pcdhga3Q91XY5 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Pcdhga3Q91XY5 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Pcdhga3Q91XY5 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Pcdhga3Q91XY5 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Pcdhga3Q91XY5 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Pcdhga3Q91XY5 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Pcdhga3Q91XY5 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Pcdhga3Q91XY5 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Pcdhga3Q91XY5 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Pcdhga3Q91XY5 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Pcdhga3Q91XY5 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Pcdhga3Q91XY5 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Pcdhga3Q91XY5 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC11.04□□□□□ -0.64
Pcdhga3Q91XY5 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Pcdhga3Q91XY5 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Pcdhga3Q91XY5 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC11.04□□□□□ -0.64
Pcdhga3Q91XY5 Gm14660-201ENSMUST00000119809 575 ntBASIC11.04□□□□□ -0.64
Pcdhga3Q91XY5 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Pcdhga3Q91XY5 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC11.04□□□□□ -0.64
Pcdhga3Q91XY5 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC11.04□□□□□ -0.64
Pcdhga3Q91XY5 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Pcdhga3Q91XY5 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC11.04□□□□□ -0.64
Pcdhga3Q91XY5 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC11.04□□□□□ -0.64
Pcdhga3Q91XY5 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Pcdhga3Q91XY5 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Pcdhga3Q91XY5 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Pcdhga3Q91XY5 AC126253.1-201ENSMUST00000227974 824 ntBASIC11.04□□□□□ -0.64
Pcdhga3Q91XY5 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Pcdhga3Q91XY5 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Pcdhga3Q91XY5 Gm26035-201ENSMUST00000083065 308 ntBASIC11.04□□□□□ -0.64
Pcdhga3Q91XY5 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Pcdhga3Q91XY5 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Pcdhga3Q91XY5 Ptpn4-201ENSMUST00000064091 10874 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Pcdhga3Q91XY5 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Pcdhga3Q91XY5 Gm8706-201ENSMUST00000197372 1491 ntBASIC11.04□□□□□ -0.64
Pcdhga3Q91XY5 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Pcdhga3Q91XY5 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Pcdhga3Q91XY5 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Pcdhga3Q91XY5 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Pcdhga3Q91XY5 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Pcdhga3Q91XY5 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC11.04□□□□□ -0.64
Pcdhga3Q91XY5 Gm10110-202ENSMUST00000228705 3220 ntBASIC11.04□□□□□ -0.64
Pcdhga3Q91XY5 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Pcdhga3Q91XY5 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC11.04□□□□□ -0.64
Pcdhga3Q91XY5 Gm43579-201ENSMUST00000202387 1307 ntBASIC11.04□□□□□ -0.64
Pcdhga3Q91XY5 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Pcdhga3Q91XY5 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC11.04□□□□□ -0.64
Pcdhga3Q91XY5 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Pcdhga3Q91XY5 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Pcdhga3Q91XY5 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Pcdhga3Q91XY5 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC11.04□□□□□ -0.64
Pcdhga3Q91XY5 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Pcdhga3Q91XY5 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pcdhga3Q91XY5 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Pcdhga3Q91XY5 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pcdhga3Q91XY5 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Pcdhga3Q91XY5 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Pcdhga3Q91XY5 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pcdhga3Q91XY5 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pcdhga3Q91XY5 Gm5859-201ENSMUST00000165401 2324 ntBASIC11.03□□□□□ -0.64
Pcdhga3Q91XY5 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pcdhga3Q91XY5 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pcdhga3Q91XY5 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Pcdhga3Q91XY5 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pcdhga3Q91XY5 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pcdhga3Q91XY5 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pcdhga3Q91XY5 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pcdhga3Q91XY5 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pcdhga3Q91XY5 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pcdhga3Q91XY5 Bmp3-203ENSMUST00000200388 6609 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Pcdhga3Q91XY5 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pcdhga3Q91XY5 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms