Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Pcdhga4Q91XY4 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhga4Q91XY4 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhga4Q91XY4 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhga4Q91XY4 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhga4Q91XY4 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhga4Q91XY4 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhga4Q91XY4 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhga4Q91XY4 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Pcdhga4Q91XY4 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdhga4Q91XY4 Gm45643-201ENSMUST00000211364 1484 ntBASIC12.21□□□□□ -0.45
Pcdhga4Q91XY4 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdhga4Q91XY4 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdhga4Q91XY4 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Pcdhga4Q91XY4 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdhga4Q91XY4 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdhga4Q91XY4 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdhga4Q91XY4 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC12.21□□□□□ -0.45
Pcdhga4Q91XY4 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdhga4Q91XY4 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdhga4Q91XY4 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.45
Pcdhga4Q91XY4 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdhga4Q91XY4 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdhga4Q91XY4 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Pcdhga4Q91XY4 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdhga4Q91XY4 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdhga4Q91XY4 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Pcdhga4Q91XY4 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdhga4Q91XY4 Gm14723-201ENSMUST00000118686 215 ntBASIC12.21□□□□□ -0.45
Pcdhga4Q91XY4 Gm11964-201ENSMUST00000120982 444 ntBASIC12.21□□□□□ -0.45
Pcdhga4Q91XY4 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC12.21□□□□□ -0.45
Pcdhga4Q91XY4 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdhga4Q91XY4 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC12.21□□□□□ -0.45
Pcdhga4Q91XY4 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC12.21□□□□□ -0.45
Pcdhga4Q91XY4 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC12.21□□□□□ -0.45
Pcdhga4Q91XY4 Gm45925-201ENSMUST00000218882 744 ntBASIC12.21□□□□□ -0.45
Pcdhga4Q91XY4 Gm8227-201ENSMUST00000223306 571 ntBASIC12.21□□□□□ -0.45
Pcdhga4Q91XY4 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdhga4Q91XY4 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC12.21□□□□□ -0.45
Pcdhga4Q91XY4 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdhga4Q91XY4 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdhga4Q91XY4 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC12.21□□□□□ -0.45
Pcdhga4Q91XY4 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Pcdhga4Q91XY4 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Pcdhga4Q91XY4 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Pcdhga4Q91XY4 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Pcdhga4Q91XY4 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Pcdhga4Q91XY4 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Pcdhga4Q91XY4 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Pcdhga4Q91XY4 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Pcdhga4Q91XY4 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC12.21□□□□□ -0.46
Pcdhga4Q91XY4 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Pcdhga4Q91XY4 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Pcdhga4Q91XY4 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Pcdhga4Q91XY4 Gm7789-202ENSMUST00000211273 1400 ntBASIC12.2□□□□□ -0.46
Pcdhga4Q91XY4 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdhga4Q91XY4 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC12.2□□□□□ -0.46
Pcdhga4Q91XY4 AC164426.2-201ENSMUST00000225993 2492 ntBASIC12.2□□□□□ -0.46
Pcdhga4Q91XY4 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdhga4Q91XY4 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdhga4Q91XY4 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC12.2□□□□□ -0.46
Pcdhga4Q91XY4 AC151895.1-201ENSMUST00000219025 1742 ntBASIC12.2□□□□□ -0.46
Pcdhga4Q91XY4 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdhga4Q91XY4 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC12.2□□□□□ -0.46
Pcdhga4Q91XY4 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdhga4Q91XY4 Gm44401-201ENSMUST00000204462 2375 ntBASIC12.2□□□□□ -0.46
Pcdhga4Q91XY4 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdhga4Q91XY4 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdhga4Q91XY4 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC12.2□□□□□ -0.46
Pcdhga4Q91XY4 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdhga4Q91XY4 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdhga4Q91XY4 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdhga4Q91XY4 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdhga4Q91XY4 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdhga4Q91XY4 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdhga4Q91XY4 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdhga4Q91XY4 Gm15370-201ENSMUST00000117158 253 ntBASIC12.2□□□□□ -0.46
Pcdhga4Q91XY4 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC12.2□□□□□ -0.46
Pcdhga4Q91XY4 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC12.2□□□□□ -0.46
Pcdhga4Q91XY4 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdhga4Q91XY4 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC12.2□□□□□ -0.46
Pcdhga4Q91XY4 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdhga4Q91XY4 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdhga4Q91XY4 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdhga4Q91XY4 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC12.2□□□□□ -0.46
Pcdhga4Q91XY4 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC12.2□□□□□ -0.46
Pcdhga4Q91XY4 Gm38158-201ENSMUST00000194617 339 ntBASIC12.2□□□□□ -0.46
Pcdhga4Q91XY4 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC12.2□□□□□ -0.46
Pcdhga4Q91XY4 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdhga4Q91XY4 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Pcdhga4Q91XY4 Rims1-204ENSMUST00000097810 6362 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Pcdhga4Q91XY4 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdhga4Q91XY4 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdhga4Q91XY4 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdhga4Q91XY4 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdhga4Q91XY4 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdhga4Q91XY4 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdhga4Q91XY4 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdhga4Q91XY4 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdhga4Q91XY4 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms