Protein–RNA interactions for Protein: Q91W78

Usb1, U6 snRNA phosphodiesterase, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usb1Q91W78 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Usb1Q91W78 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Usb1Q91W78 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC12.26□□□□□ -0.45
Usb1Q91W78 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC12.26□□□□□ -0.45
Usb1Q91W78 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
Usb1Q91W78 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC12.26□□□□□ -0.45
Usb1Q91W78 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Usb1Q91W78 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Usb1Q91W78 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC12.26□□□□□ -0.45
Usb1Q91W78 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Usb1Q91W78 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Usb1Q91W78 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Usb1Q91W78 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Usb1Q91W78 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Usb1Q91W78 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Usb1Q91W78 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC12.26□□□□□ -0.45
Usb1Q91W78 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC12.26□□□□□ -0.45
Usb1Q91W78 Gm4986-201ENSMUST00000119731 549 ntBASIC12.26□□□□□ -0.45
Usb1Q91W78 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Usb1Q91W78 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Usb1Q91W78 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC12.26□□□□□ -0.45
Usb1Q91W78 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC12.26□□□□□ -0.45
Usb1Q91W78 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC12.26□□□□□ -0.45
Usb1Q91W78 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC12.26□□□□□ -0.45
Usb1Q91W78 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC12.26□□□□□ -0.45
Usb1Q91W78 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Usb1Q91W78 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Usb1Q91W78 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Usb1Q91W78 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Usb1Q91W78 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Usb1Q91W78 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Usb1Q91W78 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Usb1Q91W78 Gm7224-201ENSMUST00000121359 2066 ntBASIC12.26□□□□□ -0.45
Usb1Q91W78 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Usb1Q91W78 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Usb1Q91W78 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Usb1Q91W78 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Usb1Q91W78 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC12.26□□□□□ -0.45
Usb1Q91W78 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Usb1Q91W78 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Usb1Q91W78 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Usb1Q91W78 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Usb1Q91W78 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Usb1Q91W78 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Usb1Q91W78 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Usb1Q91W78 Gm8228-201ENSMUST00000189949 2192 ntBASIC12.25□□□□□ -0.45
Usb1Q91W78 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Usb1Q91W78 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC12.25□□□□□ -0.45
Usb1Q91W78 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Usb1Q91W78 Tat-201ENSMUST00000001720 2375 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Usb1Q91W78 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Usb1Q91W78 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Usb1Q91W78 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Usb1Q91W78 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Usb1Q91W78 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Usb1Q91W78 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Usb1Q91W78 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Usb1Q91W78 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Usb1Q91W78 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Usb1Q91W78 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Usb1Q91W78 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Usb1Q91W78 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Usb1Q91W78 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Usb1Q91W78 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Usb1Q91W78 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Usb1Q91W78 Gm15370-201ENSMUST00000117158 253 ntBASIC12.25□□□□□ -0.45
Usb1Q91W78 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC12.25□□□□□ -0.45
Usb1Q91W78 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC12.25□□□□□ -0.45
Usb1Q91W78 Gm13492-201ENSMUST00000119772 665 ntBASIC12.25□□□□□ -0.45
Usb1Q91W78 Gm12502-201ENSMUST00000120197 444 ntBASIC12.25□□□□□ -0.45
Usb1Q91W78 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Usb1Q91W78 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC12.25□□□□□ -0.45
Usb1Q91W78 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Usb1Q91W78 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Usb1Q91W78 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Usb1Q91W78 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC12.25□□□□□ -0.45
Usb1Q91W78 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC12.25□□□□□ -0.45
Usb1Q91W78 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC12.25□□□□□ -0.45
Usb1Q91W78 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC12.25□□□□□ -0.45
Usb1Q91W78 Gm5904-201ENSMUST00000210286 865 ntBASIC12.25□□□□□ -0.45
Usb1Q91W78 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC12.25□□□□□ -0.45
Usb1Q91W78 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Usb1Q91W78 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Usb1Q91W78 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Usb1Q91W78 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Usb1Q91W78 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC12.25□□□□□ -0.45
Usb1Q91W78 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Usb1Q91W78 Gm10548-201ENSMUST00000097631 2629 ntBASIC12.25□□□□□ -0.45
Usb1Q91W78 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Usb1Q91W78 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Usb1Q91W78 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC12.25□□□□□ -0.45
Usb1Q91W78 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC12.25□□□□□ -0.45
Usb1Q91W78 Gm37600-201ENSMUST00000193764 3292 ntBASIC12.25□□□□□ -0.45
Usb1Q91W78 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
Usb1Q91W78 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Usb1Q91W78 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Usb1Q91W78 Hspa5-201ENSMUST00000028222 3672 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Usb1Q91W78 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Usb1Q91W78 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC12.25□□□□□ -0.45
Usb1Q91W78 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 49.3 ms