Protein–RNA interactions for Protein: Q91W36

Usp3, Ubiquitin carboxyl-terminal hydrolase 3, mousemouse

Known RBP Predictions only

Length 520 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp3Q91W36 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Usp3Q91W36 Gm22042-201ENSMUST00000082989 165 ntBASIC12.82□□□□□ -0.36
Usp3Q91W36 Gm26232-201ENSMUST00000083360 166 ntBASIC12.82□□□□□ -0.36
Usp3Q91W36 Rnu1b6-201ENSMUST00000083839 166 ntBASIC12.82□□□□□ -0.36
Usp3Q91W36 Gm26110-201ENSMUST00000083971 165 ntBASIC12.82□□□□□ -0.36
Usp3Q91W36 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Usp3Q91W36 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Usp3Q91W36 Gm20554-201ENSMUST00000177421 2352 ntBASIC12.82□□□□□ -0.36
Usp3Q91W36 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Usp3Q91W36 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Usp3Q91W36 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Usp3Q91W36 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Usp3Q91W36 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Usp3Q91W36 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Usp3Q91W36 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Usp3Q91W36 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Usp3Q91W36 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Usp3Q91W36 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Usp3Q91W36 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC12.81□□□□□ -0.36
Usp3Q91W36 Gm45342-201ENSMUST00000210903 1363 ntBASIC12.81□□□□□ -0.36
Usp3Q91W36 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Usp3Q91W36 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Usp3Q91W36 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
Usp3Q91W36 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Usp3Q91W36 Hormad1-203ENSMUST00000107154 1444 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Usp3Q91W36 Gm44207-201ENSMUST00000204568 1424 ntBASIC12.81□□□□□ -0.36
Usp3Q91W36 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Usp3Q91W36 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Usp3Q91W36 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Usp3Q91W36 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Usp3Q91W36 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC12.81□□□□□ -0.36
Usp3Q91W36 4930532G15Rik-202ENSMUST00000195314 1457 ntBASIC12.81□□□□□ -0.36
Usp3Q91W36 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Usp3Q91W36 Gm12015-201ENSMUST00000117065 843 ntBASIC12.81□□□□□ -0.36
Usp3Q91W36 Gm6938-201ENSMUST00000123014 771 ntTSL 3 BASIC12.81□□□□□ -0.36
Usp3Q91W36 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC12.81□□□□□ -0.36
Usp3Q91W36 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Usp3Q91W36 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC12.81□□□□□ -0.36
Usp3Q91W36 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Usp3Q91W36 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Usp3Q91W36 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Usp3Q91W36 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Usp3Q91W36 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Usp3Q91W36 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Usp3Q91W36 Ube2d3-216ENSMUST00000199613 738 ntAPPRIS P2 TSL 3 BASIC12.81□□□□□ -0.36
Usp3Q91W36 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC12.81□□□□□ -0.36
Usp3Q91W36 CT025525.1-201ENSMUST00000226325 1054 ntBASIC12.81□□□□□ -0.36
Usp3Q91W36 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Usp3Q91W36 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Usp3Q91W36 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Usp3Q91W36 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Usp3Q91W36 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Usp3Q91W36 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Usp3Q91W36 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Usp3Q91W36 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC12.81□□□□□ -0.36
Usp3Q91W36 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Usp3Q91W36 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Usp3Q91W36 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Usp3Q91W36 Gm44260-201ENSMUST00000204946 2094 ntBASIC12.81□□□□□ -0.36
Usp3Q91W36 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Usp3Q91W36 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Usp3Q91W36 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC12.8□□□□□ -0.36
Usp3Q91W36 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC12.8□□□□□ -0.36
Usp3Q91W36 Gm10782-202ENSMUST00000223775 1480 ntBASIC12.8□□□□□ -0.36
Usp3Q91W36 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Usp3Q91W36 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Usp3Q91W36 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Usp3Q91W36 Gm8038-201ENSMUST00000164674 2044 ntBASIC12.8□□□□□ -0.36
Usp3Q91W36 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC12.8□□□□□ -0.36
Usp3Q91W36 AC126444.1-201ENSMUST00000225938 1768 ntBASIC12.8□□□□□ -0.36
Usp3Q91W36 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Usp3Q91W36 Mir877-201ENSMUST00000104738 85 ntBASIC12.8□□□□□ -0.36
Usp3Q91W36 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC12.8□□□□□ -0.36
Usp3Q91W36 Gm9083-201ENSMUST00000120423 819 ntBASIC12.8□□□□□ -0.36
Usp3Q91W36 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Usp3Q91W36 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Usp3Q91W36 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Usp3Q91W36 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Usp3Q91W36 Ppp1r2-ps9-202ENSMUST00000173852 882 ntBASIC12.8□□□□□ -0.36
Usp3Q91W36 1600019K03Rik-201ENSMUST00000187829 477 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Usp3Q91W36 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Usp3Q91W36 Gm44958-201ENSMUST00000203734 736 ntBASIC12.8□□□□□ -0.36
Usp3Q91W36 AC165256.1-201ENSMUST00000216687 670 ntTSL 2 BASIC12.8□□□□□ -0.36
Usp3Q91W36 AC162940.1-201ENSMUST00000224745 1167 ntBASIC12.8□□□□□ -0.36
Usp3Q91W36 AC154838.2-201ENSMUST00000226602 747 ntBASIC12.8□□□□□ -0.36
Usp3Q91W36 AC126253.1-202ENSMUST00000226732 835 ntBASIC12.8□□□□□ -0.36
Usp3Q91W36 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Usp3Q91W36 Gm10312-201ENSMUST00000078515 489 ntBASIC12.8□□□□□ -0.36
Usp3Q91W36 Gm5941-201ENSMUST00000096371 560 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Usp3Q91W36 BC061237-201ENSMUST00000096899 899 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Usp3Q91W36 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Usp3Q91W36 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Usp3Q91W36 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Usp3Q91W36 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Usp3Q91W36 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Usp3Q91W36 AC122197.2-201ENSMUST00000219196 1635 ntBASIC12.8□□□□□ -0.36
Usp3Q91W36 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Usp3Q91W36 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Usp3Q91W36 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Usp3Q91W36 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 68.3 ms