Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TraipQ8VIG6 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC13.23□□□□□ -0.29
TraipQ8VIG6 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TraipQ8VIG6 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
TraipQ8VIG6 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
TraipQ8VIG6 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
TraipQ8VIG6 Tnfrsf9-205ENSMUST00000116257 2115 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
TraipQ8VIG6 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
TraipQ8VIG6 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
TraipQ8VIG6 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TraipQ8VIG6 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
TraipQ8VIG6 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC13.22□□□□□ -0.29
TraipQ8VIG6 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC13.22□□□□□ -0.29
TraipQ8VIG6 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TraipQ8VIG6 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TraipQ8VIG6 Gm9333-201ENSMUST00000205452 1323 ntBASIC13.22□□□□□ -0.29
TraipQ8VIG6 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TraipQ8VIG6 Grk6-205ENSMUST00000224653 2976 ntBASIC13.22□□□□□ -0.29
TraipQ8VIG6 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TraipQ8VIG6 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
TraipQ8VIG6 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TraipQ8VIG6 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TraipQ8VIG6 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
TraipQ8VIG6 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
TraipQ8VIG6 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TraipQ8VIG6 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
TraipQ8VIG6 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC13.22□□□□□ -0.29
TraipQ8VIG6 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TraipQ8VIG6 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC13.22□□□□□ -0.29
TraipQ8VIG6 Gm12566-201ENSMUST00000121479 359 ntBASIC13.22□□□□□ -0.29
TraipQ8VIG6 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC13.22□□□□□ -0.29
TraipQ8VIG6 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TraipQ8VIG6 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
TraipQ8VIG6 Gm18734-201ENSMUST00000172937 808 ntBASIC13.22□□□□□ -0.29
TraipQ8VIG6 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
TraipQ8VIG6 Gm37986-201ENSMUST00000193285 383 ntBASIC13.22□□□□□ -0.29
TraipQ8VIG6 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TraipQ8VIG6 Gm270-201ENSMUST00000223010 976 ntBASIC13.22□□□□□ -0.29
TraipQ8VIG6 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC13.22□□□□□ -0.29
TraipQ8VIG6 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TraipQ8VIG6 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TraipQ8VIG6 Eya1-209ENSMUST00000190337 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TraipQ8VIG6 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
TraipQ8VIG6 Gm19445-201ENSMUST00000193649 2438 ntBASIC13.22□□□□□ -0.29
TraipQ8VIG6 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
TraipQ8VIG6 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TraipQ8VIG6 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TraipQ8VIG6 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TraipQ8VIG6 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
TraipQ8VIG6 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TraipQ8VIG6 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TraipQ8VIG6 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
TraipQ8VIG6 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
TraipQ8VIG6 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
TraipQ8VIG6 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TraipQ8VIG6 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TraipQ8VIG6 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
TraipQ8VIG6 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
TraipQ8VIG6 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TraipQ8VIG6 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TraipQ8VIG6 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TraipQ8VIG6 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TraipQ8VIG6 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TraipQ8VIG6 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TraipQ8VIG6 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TraipQ8VIG6 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TraipQ8VIG6 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TraipQ8VIG6 Gm23912-201ENSMUST00000104687 87 ntBASIC13.21□□□□□ -0.29
TraipQ8VIG6 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC13.21□□□□□ -0.29
TraipQ8VIG6 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC13.21□□□□□ -0.29
TraipQ8VIG6 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC13.21□□□□□ -0.29
TraipQ8VIG6 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC13.21□□□□□ -0.29
TraipQ8VIG6 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
TraipQ8VIG6 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC13.21□□□□□ -0.29
TraipQ8VIG6 Gm28071-201ENSMUST00000190355 478 ntBASIC13.21□□□□□ -0.29
TraipQ8VIG6 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TraipQ8VIG6 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TraipQ8VIG6 Dus4l-201ENSMUST00000020977 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TraipQ8VIG6 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TraipQ8VIG6 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TraipQ8VIG6 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TraipQ8VIG6 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
TraipQ8VIG6 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TraipQ8VIG6 Paupar-201ENSMUST00000194826 3482 ntBASIC13.21□□□□□ -0.29
TraipQ8VIG6 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TraipQ8VIG6 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TraipQ8VIG6 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TraipQ8VIG6 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TraipQ8VIG6 Mta1-202ENSMUST00000069690 2697 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
TraipQ8VIG6 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
TraipQ8VIG6 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
TraipQ8VIG6 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
TraipQ8VIG6 CU062626.3-201ENSMUST00000225522 1411 ntBASIC13.21□□□□□ -0.3
TraipQ8VIG6 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC13.21□□□□□ -0.3
TraipQ8VIG6 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
TraipQ8VIG6 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
TraipQ8VIG6 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
TraipQ8VIG6 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
TraipQ8VIG6 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
TraipQ8VIG6 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 59.9 ms