Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Gm28693-202ENSMUST00000190758 331 ntBASIC12.5□□□□□ -0.41
Rpa1Q8VEE4 Gm15396-201ENSMUST00000209101 1089 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Rpa1Q8VEE4 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC12.5□□□□□ -0.41
Rpa1Q8VEE4 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rpa1Q8VEE4 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Rpa1Q8VEE4 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rpa1Q8VEE4 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rpa1Q8VEE4 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Rpa1Q8VEE4 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC12.5□□□□□ -0.41
Rpa1Q8VEE4 Gm42498-201ENSMUST00000199981 1372 ntBASIC12.5□□□□□ -0.41
Rpa1Q8VEE4 Gm3365-201ENSMUST00000216296 1480 ntBASIC12.5□□□□□ -0.41
Rpa1Q8VEE4 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rpa1Q8VEE4 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rpa1Q8VEE4 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Rpa1Q8VEE4 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rpa1Q8VEE4 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rpa1Q8VEE4 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rpa1Q8VEE4 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Rpa1Q8VEE4 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC12.5□□□□□ -0.41
Rpa1Q8VEE4 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Rpa1Q8VEE4 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Rpa1Q8VEE4 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC12.5□□□□□ -0.41
Rpa1Q8VEE4 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rpa1Q8VEE4 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rpa1Q8VEE4 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rpa1Q8VEE4 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC12.5□□□□□ -0.41
Rpa1Q8VEE4 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rpa1Q8VEE4 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rpa1Q8VEE4 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rpa1Q8VEE4 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC12.49□□□□□ -0.41
Rpa1Q8VEE4 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rpa1Q8VEE4 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rpa1Q8VEE4 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rpa1Q8VEE4 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rpa1Q8VEE4 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rpa1Q8VEE4 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Rpa1Q8VEE4 Gm44260-201ENSMUST00000204946 2094 ntBASIC12.49□□□□□ -0.41
Rpa1Q8VEE4 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Rpa1Q8VEE4 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rpa1Q8VEE4 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rpa1Q8VEE4 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC12.49□□□□□ -0.41
Rpa1Q8VEE4 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Rpa1Q8VEE4 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rpa1Q8VEE4 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rpa1Q8VEE4 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC12.49□□□□□ -0.41
Rpa1Q8VEE4 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rpa1Q8VEE4 Gm15074-201ENSMUST00000117603 936 ntBASIC12.49□□□□□ -0.41
Rpa1Q8VEE4 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Rpa1Q8VEE4 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Rpa1Q8VEE4 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rpa1Q8VEE4 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC12.49□□□□□ -0.41
Rpa1Q8VEE4 Gm44397-201ENSMUST00000195950 113 ntBASIC12.49□□□□□ -0.41
Rpa1Q8VEE4 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC12.49□□□□□ -0.41
Rpa1Q8VEE4 Gm44270-201ENSMUST00000203084 1234 ntBASIC12.49□□□□□ -0.41
Rpa1Q8VEE4 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Rpa1Q8VEE4 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC12.49□□□□□ -0.41
Rpa1Q8VEE4 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC12.49□□□□□ -0.41
Rpa1Q8VEE4 Gm7730-201ENSMUST00000212486 454 ntBASIC12.49□□□□□ -0.41
Rpa1Q8VEE4 AC098716.1-201ENSMUST00000213527 703 ntBASIC12.49□□□□□ -0.41
Rpa1Q8VEE4 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rpa1Q8VEE4 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rpa1Q8VEE4 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Rpa1Q8VEE4 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC12.49□□□□□ -0.41
Rpa1Q8VEE4 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Rpa1Q8VEE4 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rpa1Q8VEE4 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Rpa1Q8VEE4 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Rpa1Q8VEE4 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rpa1Q8VEE4 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Rpa1Q8VEE4 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
Rpa1Q8VEE4 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Rpa1Q8VEE4 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rpa1Q8VEE4 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rpa1Q8VEE4 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rpa1Q8VEE4 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rpa1Q8VEE4 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rpa1Q8VEE4 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC12.48□□□□□ -0.41
Rpa1Q8VEE4 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC12.48□□□□□ -0.41
Rpa1Q8VEE4 AC130671.2-201ENSMUST00000227224 1621 ntBASIC12.48□□□□□ -0.41
Rpa1Q8VEE4 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rpa1Q8VEE4 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rpa1Q8VEE4 Gm15544-201ENSMUST00000118776 1531 ntBASIC12.48□□□□□ -0.41
Rpa1Q8VEE4 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC12.48□□□□□ -0.41
Rpa1Q8VEE4 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Rpa1Q8VEE4 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Rpa1Q8VEE4 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rpa1Q8VEE4 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rpa1Q8VEE4 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rpa1Q8VEE4 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rpa1Q8VEE4 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC12.48□□□□□ -0.41
Rpa1Q8VEE4 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rpa1Q8VEE4 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Rpa1Q8VEE4 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
Rpa1Q8VEE4 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rpa1Q8VEE4 Il4-203ENSMUST00000140684 530 ntTSL 2 BASIC12.48□□□□□ -0.41
Rpa1Q8VEE4 Il4-204ENSMUST00000150568 605 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Rpa1Q8VEE4 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC12.48□□□□□ -0.41
Rpa1Q8VEE4 Gm6983-201ENSMUST00000214912 628 ntBASIC12.48□□□□□ -0.41
Rpa1Q8VEE4 AC125206.2-201ENSMUST00000217454 574 ntBASIC12.48□□□□□ -0.41
Rpa1Q8VEE4 AC154757.2-201ENSMUST00000228885 743 ntBASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms