Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Vps39Q8R5L3 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC12.37□□□□□ -0.43
Vps39Q8R5L3 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Vps39Q8R5L3 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC12.37□□□□□ -0.43
Vps39Q8R5L3 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC12.37□□□□□ -0.43
Vps39Q8R5L3 Gm13315-201ENSMUST00000120376 991 ntBASIC12.37□□□□□ -0.43
Vps39Q8R5L3 Gm11597-201ENSMUST00000121423 964 ntBASIC12.37□□□□□ -0.43
Vps39Q8R5L3 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC12.37□□□□□ -0.43
Vps39Q8R5L3 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Vps39Q8R5L3 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC12.37□□□□□ -0.43
Vps39Q8R5L3 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC12.37□□□□□ -0.43
Vps39Q8R5L3 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Vps39Q8R5L3 Gm17150-201ENSMUST00000165577 381 ntBASIC12.37□□□□□ -0.43
Vps39Q8R5L3 Gm8738-201ENSMUST00000172606 329 ntBASIC12.37□□□□□ -0.43
Vps39Q8R5L3 Gm25927-201ENSMUST00000175058 117 ntBASIC12.37□□□□□ -0.43
Vps39Q8R5L3 Gm37748-201ENSMUST00000194379 1140 ntBASIC12.37□□□□□ -0.43
Vps39Q8R5L3 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC12.37□□□□□ -0.43
Vps39Q8R5L3 Gm5781-201ENSMUST00000219792 443 ntBASIC12.37□□□□□ -0.43
Vps39Q8R5L3 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC12.37□□□□□ -0.43
Vps39Q8R5L3 n-R5s195-201ENSMUST00000082891 119 ntBASIC12.37□□□□□ -0.43
Vps39Q8R5L3 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Vps39Q8R5L3 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vps39Q8R5L3 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Vps39Q8R5L3 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC12.37□□□□□ -0.43
Vps39Q8R5L3 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Vps39Q8R5L3 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vps39Q8R5L3 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC12.37□□□□□ -0.43
Vps39Q8R5L3 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Vps39Q8R5L3 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Vps39Q8R5L3 Gm4780-202ENSMUST00000215200 2644 ntBASIC12.37□□□□□ -0.43
Vps39Q8R5L3 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vps39Q8R5L3 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vps39Q8R5L3 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vps39Q8R5L3 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Vps39Q8R5L3 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Vps39Q8R5L3 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vps39Q8R5L3 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC12.36□□□□□ -0.43
Vps39Q8R5L3 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vps39Q8R5L3 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Vps39Q8R5L3 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Vps39Q8R5L3 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vps39Q8R5L3 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vps39Q8R5L3 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vps39Q8R5L3 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vps39Q8R5L3 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vps39Q8R5L3 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vps39Q8R5L3 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Vps39Q8R5L3 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vps39Q8R5L3 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Vps39Q8R5L3 Gm5884-201ENSMUST00000036712 1479 ntBASIC12.36□□□□□ -0.43
Vps39Q8R5L3 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC12.36□□□□□ -0.43
Vps39Q8R5L3 Gm11591-201ENSMUST00000120063 702 ntBASIC12.36□□□□□ -0.43
Vps39Q8R5L3 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC12.36□□□□□ -0.43
Vps39Q8R5L3 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Vps39Q8R5L3 Gm8602-201ENSMUST00000184045 607 ntBASIC12.36□□□□□ -0.43
Vps39Q8R5L3 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC12.36□□□□□ -0.43
Vps39Q8R5L3 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vps39Q8R5L3 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Vps39Q8R5L3 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vps39Q8R5L3 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vps39Q8R5L3 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vps39Q8R5L3 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vps39Q8R5L3 AC114008.2-201ENSMUST00000227699 1347 ntBASIC12.36□□□□□ -0.43
Vps39Q8R5L3 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vps39Q8R5L3 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Vps39Q8R5L3 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Vps39Q8R5L3 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Vps39Q8R5L3 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Vps39Q8R5L3 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Vps39Q8R5L3 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC12.35□□□□□ -0.43
Vps39Q8R5L3 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Vps39Q8R5L3 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC12.35□□□□□ -0.43
Vps39Q8R5L3 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Vps39Q8R5L3 Ptprm-203ENSMUST00000224091 3773 ntBASIC12.35□□□□□ -0.43
Vps39Q8R5L3 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Vps39Q8R5L3 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Vps39Q8R5L3 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Vps39Q8R5L3 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Vps39Q8R5L3 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Vps39Q8R5L3 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Vps39Q8R5L3 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC12.35□□□□□ -0.43
Vps39Q8R5L3 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC12.35□□□□□ -0.43
Vps39Q8R5L3 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Vps39Q8R5L3 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC12.35□□□□□ -0.43
Vps39Q8R5L3 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC12.35□□□□□ -0.43
Vps39Q8R5L3 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Vps39Q8R5L3 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC12.35□□□□□ -0.43
Vps39Q8R5L3 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Vps39Q8R5L3 Gm18304-201ENSMUST00000189162 546 ntBASIC12.35□□□□□ -0.43
Vps39Q8R5L3 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC12.35□□□□□ -0.43
Vps39Q8R5L3 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC12.35□□□□□ -0.43
Vps39Q8R5L3 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Vps39Q8R5L3 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Vps39Q8R5L3 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Vps39Q8R5L3 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Vps39Q8R5L3 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
Vps39Q8R5L3 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Vps39Q8R5L3 Paupar-201ENSMUST00000194826 3482 ntBASIC12.35□□□□□ -0.43
Vps39Q8R5L3 Gm7104-201ENSMUST00000179741 2532 ntBASIC12.35□□□□□ -0.43
Vps39Q8R5L3 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms