Protein–RNA interactions for Protein: Q8R1J3

Zcchc9, Zinc finger CCHC domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zcchc9Q8R1J3 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC12.38□□□□□ -0.43
Zcchc9Q8R1J3 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Zcchc9Q8R1J3 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Zcchc9Q8R1J3 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Zcchc9Q8R1J3 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Zcchc9Q8R1J3 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Zcchc9Q8R1J3 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC12.38□□□□□ -0.43
Zcchc9Q8R1J3 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Zcchc9Q8R1J3 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Zcchc9Q8R1J3 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Zcchc9Q8R1J3 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Zcchc9Q8R1J3 Gm45495-201ENSMUST00000200940 1700 ntBASIC12.38□□□□□ -0.43
Zcchc9Q8R1J3 Gm23200-201ENSMUST00000104379 132 ntBASIC12.38□□□□□ -0.43
Zcchc9Q8R1J3 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Zcchc9Q8R1J3 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC12.38□□□□□ -0.43
Zcchc9Q8R1J3 Gm11331-201ENSMUST00000119764 288 ntBASIC12.38□□□□□ -0.43
Zcchc9Q8R1J3 Gm9083-201ENSMUST00000120423 819 ntBASIC12.38□□□□□ -0.43
Zcchc9Q8R1J3 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC12.38□□□□□ -0.43
Zcchc9Q8R1J3 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC12.38□□□□□ -0.43
Zcchc9Q8R1J3 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Zcchc9Q8R1J3 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Zcchc9Q8R1J3 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Zcchc9Q8R1J3 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Zcchc9Q8R1J3 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Zcchc9Q8R1J3 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Zcchc9Q8R1J3 Gm22334-201ENSMUST00000158070 133 ntBASIC12.38□□□□□ -0.43
Zcchc9Q8R1J3 Gm8018-201ENSMUST00000173536 789 ntBASIC12.38□□□□□ -0.43
Zcchc9Q8R1J3 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC12.38□□□□□ -0.43
Zcchc9Q8R1J3 Gm34767-201ENSMUST00000191813 1062 ntBASIC12.38□□□□□ -0.43
Zcchc9Q8R1J3 Gm43378-201ENSMUST00000199336 582 ntBASIC12.38□□□□□ -0.43
Zcchc9Q8R1J3 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Zcchc9Q8R1J3 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Zcchc9Q8R1J3 CT025694.1-201ENSMUST00000226188 934 ntBASIC12.38□□□□□ -0.43
Zcchc9Q8R1J3 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Zcchc9Q8R1J3 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Zcchc9Q8R1J3 Mir339-201ENSMUST00000083659 96 ntBASIC12.38□□□□□ -0.43
Zcchc9Q8R1J3 Nupl1-206ENSMUST00000225111 2936 ntBASIC12.38□□□□□ -0.43
Zcchc9Q8R1J3 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Zcchc9Q8R1J3 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Zcchc9Q8R1J3 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Zcchc9Q8R1J3 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Zcchc9Q8R1J3 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
Zcchc9Q8R1J3 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC12.38□□□□□ -0.43
Zcchc9Q8R1J3 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Zcchc9Q8R1J3 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Zcchc9Q8R1J3 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Zcchc9Q8R1J3 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
Zcchc9Q8R1J3 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC12.38□□□□□ -0.43
Zcchc9Q8R1J3 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Zcchc9Q8R1J3 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Zcchc9Q8R1J3 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Zcchc9Q8R1J3 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Zcchc9Q8R1J3 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
Zcchc9Q8R1J3 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Zcchc9Q8R1J3 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC12.37□□□□□ -0.43
Zcchc9Q8R1J3 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Zcchc9Q8R1J3 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Zcchc9Q8R1J3 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Zcchc9Q8R1J3 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Zcchc9Q8R1J3 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Zcchc9Q8R1J3 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Zcchc9Q8R1J3 Gm13296-201ENSMUST00000117854 997 ntBASIC12.37□□□□□ -0.43
Zcchc9Q8R1J3 Gm13996-201ENSMUST00000118456 430 ntBASIC12.37□□□□□ -0.43
Zcchc9Q8R1J3 Gm14999-201ENSMUST00000121039 624 ntBASIC12.37□□□□□ -0.43
Zcchc9Q8R1J3 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC12.37□□□□□ -0.43
Zcchc9Q8R1J3 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC12.37□□□□□ -0.43
Zcchc9Q8R1J3 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC12.37□□□□□ -0.43
Zcchc9Q8R1J3 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Zcchc9Q8R1J3 Gm8913-201ENSMUST00000209491 641 ntBASIC12.37□□□□□ -0.43
Zcchc9Q8R1J3 Gm8959-201ENSMUST00000213150 571 ntBASIC12.37□□□□□ -0.43
Zcchc9Q8R1J3 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Zcchc9Q8R1J3 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Zcchc9Q8R1J3 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Zcchc9Q8R1J3 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Zcchc9Q8R1J3 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Zcchc9Q8R1J3 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Zcchc9Q8R1J3 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Zcchc9Q8R1J3 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC12.37□□□□□ -0.43
Zcchc9Q8R1J3 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
Zcchc9Q8R1J3 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Zcchc9Q8R1J3 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Zcchc9Q8R1J3 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Zcchc9Q8R1J3 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Zcchc9Q8R1J3 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Zcchc9Q8R1J3 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Zcchc9Q8R1J3 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Zcchc9Q8R1J3 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC12.37□□□□□ -0.43
Zcchc9Q8R1J3 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Zcchc9Q8R1J3 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC12.37□□□□□ -0.43
Zcchc9Q8R1J3 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC12.37□□□□□ -0.43
Zcchc9Q8R1J3 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Zcchc9Q8R1J3 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Zcchc9Q8R1J3 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Zcchc9Q8R1J3 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Zcchc9Q8R1J3 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Zcchc9Q8R1J3 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Zcchc9Q8R1J3 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Zcchc9Q8R1J3 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Zcchc9Q8R1J3 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Zcchc9Q8R1J3 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms