Protein–RNA interactions for Protein: Q8CIE6

Copa, Coatomer subunit alpha, mousemouse

Known RBP Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopaQ8CIE6 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
CopaQ8CIE6 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
CopaQ8CIE6 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
CopaQ8CIE6 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.39
CopaQ8CIE6 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.39
CopaQ8CIE6 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.39
CopaQ8CIE6 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
CopaQ8CIE6 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC12.65□□□□□ -0.39
CopaQ8CIE6 Gm43051-201ENSMUST00000201096 2678 ntBASIC12.65□□□□□ -0.39
CopaQ8CIE6 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC12.64□□□□□ -0.39
CopaQ8CIE6 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
CopaQ8CIE6 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CopaQ8CIE6 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
CopaQ8CIE6 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CopaQ8CIE6 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CopaQ8CIE6 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CopaQ8CIE6 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
CopaQ8CIE6 Gm12749-201ENSMUST00000122138 1159 ntBASIC12.64□□□□□ -0.39
CopaQ8CIE6 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC12.64□□□□□ -0.39
CopaQ8CIE6 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
CopaQ8CIE6 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC12.64□□□□□ -0.39
CopaQ8CIE6 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC12.64□□□□□ -0.39
CopaQ8CIE6 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC12.64□□□□□ -0.39
CopaQ8CIE6 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC12.64□□□□□ -0.39
CopaQ8CIE6 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC12.64□□□□□ -0.39
CopaQ8CIE6 AC159747.1-201ENSMUST00000219903 265 ntBASIC12.64□□□□□ -0.39
CopaQ8CIE6 AC154305.4-201ENSMUST00000224520 614 ntBASIC12.64□□□□□ -0.39
CopaQ8CIE6 CT485787.1-201ENSMUST00000225617 968 ntBASIC12.64□□□□□ -0.39
CopaQ8CIE6 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CopaQ8CIE6 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CopaQ8CIE6 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CopaQ8CIE6 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CopaQ8CIE6 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CopaQ8CIE6 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CopaQ8CIE6 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC12.64□□□□□ -0.39
CopaQ8CIE6 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
CopaQ8CIE6 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
CopaQ8CIE6 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CopaQ8CIE6 Gm8228-201ENSMUST00000189949 2192 ntBASIC12.64□□□□□ -0.39
CopaQ8CIE6 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CopaQ8CIE6 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CopaQ8CIE6 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
CopaQ8CIE6 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CopaQ8CIE6 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CopaQ8CIE6 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC12.64□□□□□ -0.39
CopaQ8CIE6 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
CopaQ8CIE6 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC12.64□□□□□ -0.39
CopaQ8CIE6 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CopaQ8CIE6 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CopaQ8CIE6 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
CopaQ8CIE6 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CopaQ8CIE6 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CopaQ8CIE6 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CopaQ8CIE6 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CopaQ8CIE6 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CopaQ8CIE6 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CopaQ8CIE6 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CopaQ8CIE6 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC12.63□□□□□ -0.39
CopaQ8CIE6 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CopaQ8CIE6 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC12.63□□□□□ -0.39
CopaQ8CIE6 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CopaQ8CIE6 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
CopaQ8CIE6 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CopaQ8CIE6 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
CopaQ8CIE6 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
CopaQ8CIE6 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
CopaQ8CIE6 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC12.63□□□□□ -0.39
CopaQ8CIE6 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
CopaQ8CIE6 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC12.63□□□□□ -0.39
CopaQ8CIE6 Gm8176-201ENSMUST00000191297 1099 ntBASIC12.63□□□□□ -0.39
CopaQ8CIE6 Gm8099-201ENSMUST00000200510 742 ntBASIC12.63□□□□□ -0.39
CopaQ8CIE6 Gm43416-201ENSMUST00000201916 1015 ntBASIC12.63□□□□□ -0.39
CopaQ8CIE6 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC12.63□□□□□ -0.39
CopaQ8CIE6 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC12.63□□□□□ -0.39
CopaQ8CIE6 Gm6082-201ENSMUST00000215204 454 ntBASIC12.63□□□□□ -0.39
CopaQ8CIE6 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CopaQ8CIE6 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CopaQ8CIE6 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
CopaQ8CIE6 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
CopaQ8CIE6 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CopaQ8CIE6 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CopaQ8CIE6 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CopaQ8CIE6 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CopaQ8CIE6 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CopaQ8CIE6 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
CopaQ8CIE6 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CopaQ8CIE6 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
CopaQ8CIE6 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
CopaQ8CIE6 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC12.63□□□□□ -0.39
CopaQ8CIE6 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CopaQ8CIE6 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
CopaQ8CIE6 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
CopaQ8CIE6 Gm44207-201ENSMUST00000204568 1424 ntBASIC12.62□□□□□ -0.39
CopaQ8CIE6 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CopaQ8CIE6 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
CopaQ8CIE6 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CopaQ8CIE6 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC12.62□□□□□ -0.39
CopaQ8CIE6 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
CopaQ8CIE6 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
CopaQ8CIE6 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 82.2 ms