Protein–RNA interactions for Protein: Q8CG80

Shf, SH2 domain-containing adapter protein F, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShfQ8CG80 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
ShfQ8CG80 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC11□□□□□ -0.65
ShfQ8CG80 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC11□□□□□ -0.65
ShfQ8CG80 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
ShfQ8CG80 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
ShfQ8CG80 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC11□□□□□ -0.65
ShfQ8CG80 AC122197.2-201ENSMUST00000219196 1635 ntBASIC11□□□□□ -0.65
ShfQ8CG80 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC11□□□□□ -0.65
ShfQ8CG80 Gm12502-201ENSMUST00000120197 444 ntBASIC11□□□□□ -0.65
ShfQ8CG80 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
ShfQ8CG80 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC11□□□□□ -0.65
ShfQ8CG80 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC11□□□□□ -0.65
ShfQ8CG80 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
ShfQ8CG80 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC11□□□□□ -0.65
ShfQ8CG80 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
ShfQ8CG80 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC11□□□□□ -0.65
ShfQ8CG80 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC11□□□□□ -0.65
ShfQ8CG80 Gm5904-201ENSMUST00000210286 865 ntBASIC11□□□□□ -0.65
ShfQ8CG80 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC11□□□□□ -0.65
ShfQ8CG80 Gm5035-201ENSMUST00000215581 927 ntBASIC11□□□□□ -0.65
ShfQ8CG80 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC11□□□□□ -0.65
ShfQ8CG80 AC125209.1-201ENSMUST00000225812 766 ntBASIC11□□□□□ -0.65
ShfQ8CG80 AC126253.1-202ENSMUST00000226732 835 ntBASIC11□□□□□ -0.65
ShfQ8CG80 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
ShfQ8CG80 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
ShfQ8CG80 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
ShfQ8CG80 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC11□□□□□ -0.65
ShfQ8CG80 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
ShfQ8CG80 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
ShfQ8CG80 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
ShfQ8CG80 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
ShfQ8CG80 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
ShfQ8CG80 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
ShfQ8CG80 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC11□□□□□ -0.65
ShfQ8CG80 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
ShfQ8CG80 Gm8793-201ENSMUST00000183069 1303 ntBASIC11□□□□□ -0.65
ShfQ8CG80 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
ShfQ8CG80 Gm5620-201ENSMUST00000077991 1348 ntBASIC11□□□□□ -0.65
ShfQ8CG80 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
ShfQ8CG80 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
ShfQ8CG80 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
ShfQ8CG80 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
ShfQ8CG80 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
ShfQ8CG80 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
ShfQ8CG80 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC11□□□□□ -0.65
ShfQ8CG80 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
ShfQ8CG80 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC11□□□□□ -0.65
ShfQ8CG80 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC11□□□□□ -0.65
ShfQ8CG80 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
ShfQ8CG80 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
ShfQ8CG80 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC11□□□□□ -0.65
ShfQ8CG80 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
ShfQ8CG80 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC10.99□□□□□ -0.65
ShfQ8CG80 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
ShfQ8CG80 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
ShfQ8CG80 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
ShfQ8CG80 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
ShfQ8CG80 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
ShfQ8CG80 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
ShfQ8CG80 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
ShfQ8CG80 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
ShfQ8CG80 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
ShfQ8CG80 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC10.99□□□□□ -0.65
ShfQ8CG80 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC10.99□□□□□ -0.65
ShfQ8CG80 Gm2606-201ENSMUST00000100754 1002 ntBASIC10.99□□□□□ -0.65
ShfQ8CG80 Gm24830-201ENSMUST00000102024 166 ntBASIC10.99□□□□□ -0.65
ShfQ8CG80 Gm12286-201ENSMUST00000119246 1002 ntBASIC10.99□□□□□ -0.65
ShfQ8CG80 Gm9431-201ENSMUST00000119765 1051 ntBASIC10.99□□□□□ -0.65
ShfQ8CG80 Gm12036-201ENSMUST00000120008 530 ntBASIC10.99□□□□□ -0.65
ShfQ8CG80 Gm16177-201ENSMUST00000120728 718 ntBASIC10.99□□□□□ -0.65
ShfQ8CG80 Gm13342-201ENSMUST00000121055 207 ntBASIC10.99□□□□□ -0.65
ShfQ8CG80 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC10.99□□□□□ -0.65
ShfQ8CG80 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
ShfQ8CG80 Gm26232-201ENSMUST00000083360 166 ntBASIC10.99□□□□□ -0.65
ShfQ8CG80 Rnu1b6-201ENSMUST00000083839 166 ntBASIC10.99□□□□□ -0.65
ShfQ8CG80 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
ShfQ8CG80 Gm42913-201ENSMUST00000197936 1853 ntBASIC10.99□□□□□ -0.65
ShfQ8CG80 CT025678.1-201ENSMUST00000214795 2972 ntBASIC10.99□□□□□ -0.65
ShfQ8CG80 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
ShfQ8CG80 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
ShfQ8CG80 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
ShfQ8CG80 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
ShfQ8CG80 Gm8706-201ENSMUST00000197372 1491 ntBASIC10.99□□□□□ -0.65
ShfQ8CG80 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
ShfQ8CG80 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
ShfQ8CG80 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC10.98□□□□□ -0.65
ShfQ8CG80 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
ShfQ8CG80 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
ShfQ8CG80 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
ShfQ8CG80 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
ShfQ8CG80 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
ShfQ8CG80 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
ShfQ8CG80 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
ShfQ8CG80 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
ShfQ8CG80 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
ShfQ8CG80 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
ShfQ8CG80 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
ShfQ8CG80 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
ShfQ8CG80 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
ShfQ8CG80 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC10.98□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 58.6 ms