Protein–RNA interactions for Protein: Q8CE13

Ccdc17, Coiled-coil domain-containing protein 17, mousemouse

Predictions only

Length 565 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc17Q8CE13 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ccdc17Q8CE13 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ccdc17Q8CE13 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Ccdc17Q8CE13 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ccdc17Q8CE13 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ccdc17Q8CE13 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Ccdc17Q8CE13 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Ccdc17Q8CE13 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Ccdc17Q8CE13 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Ccdc17Q8CE13 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ccdc17Q8CE13 Gm43823-201ENSMUST00000197391 1808 ntBASIC12.88□□□□□ -0.35
Ccdc17Q8CE13 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC12.88□□□□□ -0.35
Ccdc17Q8CE13 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ccdc17Q8CE13 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ccdc17Q8CE13 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ccdc17Q8CE13 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ccdc17Q8CE13 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ccdc17Q8CE13 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ccdc17Q8CE13 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ccdc17Q8CE13 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Ccdc17Q8CE13 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC12.88□□□□□ -0.35
Ccdc17Q8CE13 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Ccdc17Q8CE13 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Ccdc17Q8CE13 Gm6963-201ENSMUST00000147879 379 ntBASIC12.88□□□□□ -0.35
Ccdc17Q8CE13 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC12.88□□□□□ -0.35
Ccdc17Q8CE13 Gm9550-201ENSMUST00000161130 862 ntBASIC12.88□□□□□ -0.35
Ccdc17Q8CE13 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC12.88□□□□□ -0.35
Ccdc17Q8CE13 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Ccdc17Q8CE13 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ccdc17Q8CE13 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Ccdc17Q8CE13 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC12.88□□□□□ -0.35
Ccdc17Q8CE13 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC12.88□□□□□ -0.35
Ccdc17Q8CE13 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ccdc17Q8CE13 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Ccdc17Q8CE13 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ccdc17Q8CE13 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Ccdc17Q8CE13 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC12.88□□□□□ -0.35
Ccdc17Q8CE13 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ccdc17Q8CE13 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ccdc17Q8CE13 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Ccdc17Q8CE13 Gm37269-201ENSMUST00000193906 1891 ntBASIC12.88□□□□□ -0.35
Ccdc17Q8CE13 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Ccdc17Q8CE13 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ccdc17Q8CE13 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ccdc17Q8CE13 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC12.88□□□□□ -0.35
Ccdc17Q8CE13 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Ccdc17Q8CE13 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ccdc17Q8CE13 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ccdc17Q8CE13 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ccdc17Q8CE13 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC12.88□□□□□ -0.35
Ccdc17Q8CE13 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Ccdc17Q8CE13 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ccdc17Q8CE13 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ccdc17Q8CE13 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ccdc17Q8CE13 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Ccdc17Q8CE13 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ccdc17Q8CE13 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Ccdc17Q8CE13 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC12.88□□□□□ -0.35
Ccdc17Q8CE13 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC12.88□□□□□ -0.35
Ccdc17Q8CE13 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC12.88□□□□□ -0.35
Ccdc17Q8CE13 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ccdc17Q8CE13 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Ccdc17Q8CE13 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccdc17Q8CE13 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC12.87□□□□□ -0.35
Ccdc17Q8CE13 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccdc17Q8CE13 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC12.87□□□□□ -0.35
Ccdc17Q8CE13 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Ccdc17Q8CE13 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC12.87□□□□□ -0.35
Ccdc17Q8CE13 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Ccdc17Q8CE13 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Ccdc17Q8CE13 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Ccdc17Q8CE13 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccdc17Q8CE13 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccdc17Q8CE13 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccdc17Q8CE13 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Ccdc17Q8CE13 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Ccdc17Q8CE13 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccdc17Q8CE13 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Ccdc17Q8CE13 Gm11831-201ENSMUST00000141538 629 ntTSL 3 BASIC12.87□□□□□ -0.35
Ccdc17Q8CE13 Gm24845-201ENSMUST00000158034 109 ntBASIC12.87□□□□□ -0.35
Ccdc17Q8CE13 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC12.87□□□□□ -0.35
Ccdc17Q8CE13 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Ccdc17Q8CE13 Gm18556-201ENSMUST00000219748 1031 ntBASIC12.87□□□□□ -0.35
Ccdc17Q8CE13 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Ccdc17Q8CE13 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccdc17Q8CE13 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccdc17Q8CE13 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccdc17Q8CE13 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccdc17Q8CE13 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC12.87□□□□□ -0.35
Ccdc17Q8CE13 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccdc17Q8CE13 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccdc17Q8CE13 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Ccdc17Q8CE13 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccdc17Q8CE13 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccdc17Q8CE13 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccdc17Q8CE13 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC12.86□□□□□ -0.35
Ccdc17Q8CE13 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC12.86□□□□□ -0.35
Ccdc17Q8CE13 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Ccdc17Q8CE13 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc17Q8CE13 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 58 ms