Protein–RNA interactions for Protein: Q8CDL9

Ccdc87, Coiled-coil domain-containing protein 87, mousemouse

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc87Q8CDL9 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc87Q8CDL9 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Ccdc87Q8CDL9 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc87Q8CDL9 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Ccdc87Q8CDL9 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc87Q8CDL9 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc87Q8CDL9 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc87Q8CDL9 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc87Q8CDL9 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc87Q8CDL9 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc87Q8CDL9 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc87Q8CDL9 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc87Q8CDL9 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC13.11□□□□□ -0.31
Ccdc87Q8CDL9 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc87Q8CDL9 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc87Q8CDL9 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc87Q8CDL9 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc87Q8CDL9 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc87Q8CDL9 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc87Q8CDL9 AC131068.2-201ENSMUST00000226175 1453 ntBASIC13.1□□□□□ -0.31
Ccdc87Q8CDL9 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ccdc87Q8CDL9 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccdc87Q8CDL9 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccdc87Q8CDL9 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccdc87Q8CDL9 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC13.1□□□□□ -0.31
Ccdc87Q8CDL9 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccdc87Q8CDL9 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccdc87Q8CDL9 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccdc87Q8CDL9 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccdc87Q8CDL9 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC13.1□□□□□ -0.31
Ccdc87Q8CDL9 Gm12957-201ENSMUST00000117835 377 ntBASIC13.1□□□□□ -0.31
Ccdc87Q8CDL9 Gm8805-201ENSMUST00000117848 313 ntBASIC13.1□□□□□ -0.31
Ccdc87Q8CDL9 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC13.1□□□□□ -0.31
Ccdc87Q8CDL9 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ccdc87Q8CDL9 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC13.1□□□□□ -0.31
Ccdc87Q8CDL9 Gm16296-201ENSMUST00000159905 325 ntBASIC13.1□□□□□ -0.31
Ccdc87Q8CDL9 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC13.1□□□□□ -0.31
Ccdc87Q8CDL9 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC13.1□□□□□ -0.31
Ccdc87Q8CDL9 Gm38319-201ENSMUST00000194537 1266 ntBASIC13.1□□□□□ -0.31
Ccdc87Q8CDL9 Gm9728-201ENSMUST00000200197 1055 ntBASIC13.1□□□□□ -0.31
Ccdc87Q8CDL9 AC165260.3-202ENSMUST00000224550 1031 ntBASIC13.1□□□□□ -0.31
Ccdc87Q8CDL9 AC126253.1-201ENSMUST00000227974 824 ntBASIC13.1□□□□□ -0.31
Ccdc87Q8CDL9 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccdc87Q8CDL9 Gm10146-201ENSMUST00000072739 309 ntBASIC13.1□□□□□ -0.31
Ccdc87Q8CDL9 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Ccdc87Q8CDL9 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccdc87Q8CDL9 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Ccdc87Q8CDL9 Mbnl2-204ENSMUST00000227012 2390 ntBASIC13.1□□□□□ -0.31
Ccdc87Q8CDL9 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccdc87Q8CDL9 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ccdc87Q8CDL9 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccdc87Q8CDL9 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccdc87Q8CDL9 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccdc87Q8CDL9 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccdc87Q8CDL9 Gm6992-201ENSMUST00000217973 1607 ntBASIC13.1□□□□□ -0.31
Ccdc87Q8CDL9 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ccdc87Q8CDL9 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ccdc87Q8CDL9 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC13.09□□□□□ -0.31
Ccdc87Q8CDL9 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ccdc87Q8CDL9 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ccdc87Q8CDL9 AC160405.1-201ENSMUST00000218207 1545 ntBASIC13.09□□□□□ -0.31
Ccdc87Q8CDL9 Gm10339-203ENSMUST00000225409 1671 ntBASIC13.09□□□□□ -0.31
Ccdc87Q8CDL9 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ccdc87Q8CDL9 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ccdc87Q8CDL9 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ccdc87Q8CDL9 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Ccdc87Q8CDL9 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ccdc87Q8CDL9 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ccdc87Q8CDL9 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ccdc87Q8CDL9 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ccdc87Q8CDL9 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ccdc87Q8CDL9 Gm1335-201ENSMUST00000121653 386 ntBASIC13.09□□□□□ -0.31
Ccdc87Q8CDL9 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Ccdc87Q8CDL9 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC13.09□□□□□ -0.31
Ccdc87Q8CDL9 Gm8038-201ENSMUST00000164674 2044 ntBASIC13.09□□□□□ -0.31
Ccdc87Q8CDL9 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Ccdc87Q8CDL9 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC13.09□□□□□ -0.31
Ccdc87Q8CDL9 Gm37660-201ENSMUST00000192754 1732 ntBASIC13.09□□□□□ -0.31
Ccdc87Q8CDL9 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Ccdc87Q8CDL9 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ccdc87Q8CDL9 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ccdc87Q8CDL9 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ccdc87Q8CDL9 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ccdc87Q8CDL9 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ccdc87Q8CDL9 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ccdc87Q8CDL9 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ccdc87Q8CDL9 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
Ccdc87Q8CDL9 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ccdc87Q8CDL9 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC13.09□□□□□ -0.31
Ccdc87Q8CDL9 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ccdc87Q8CDL9 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC13.09□□□□□ -0.31
Ccdc87Q8CDL9 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Ccdc87Q8CDL9 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ccdc87Q8CDL9 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
Ccdc87Q8CDL9 Ptprm-203ENSMUST00000224091 3773 ntBASIC13.09□□□□□ -0.31
Ccdc87Q8CDL9 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Ccdc87Q8CDL9 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Ccdc87Q8CDL9 Gm18983-201ENSMUST00000222884 2729 ntBASIC13.09□□□□□ -0.31
Ccdc87Q8CDL9 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Ccdc87Q8CDL9 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC13.09□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 57.4 ms