Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vcpip1Q8CDG3 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Vcpip1Q8CDG3 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Vcpip1Q8CDG3 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vcpip1Q8CDG3 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Vcpip1Q8CDG3 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vcpip1Q8CDG3 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vcpip1Q8CDG3 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
Vcpip1Q8CDG3 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Vcpip1Q8CDG3 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC13.28□□□□□ -0.28
Vcpip1Q8CDG3 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vcpip1Q8CDG3 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vcpip1Q8CDG3 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC13.28□□□□□ -0.28
Vcpip1Q8CDG3 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Vcpip1Q8CDG3 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
Vcpip1Q8CDG3 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC13.28□□□□□ -0.28
Vcpip1Q8CDG3 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Vcpip1Q8CDG3 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC13.28□□□□□ -0.28
Vcpip1Q8CDG3 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC13.28□□□□□ -0.28
Vcpip1Q8CDG3 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC13.28□□□□□ -0.28
Vcpip1Q8CDG3 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC13.28□□□□□ -0.28
Vcpip1Q8CDG3 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC13.28□□□□□ -0.28
Vcpip1Q8CDG3 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vcpip1Q8CDG3 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vcpip1Q8CDG3 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vcpip1Q8CDG3 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vcpip1Q8CDG3 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC13.28□□□□□ -0.28
Vcpip1Q8CDG3 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Vcpip1Q8CDG3 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vcpip1Q8CDG3 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
Vcpip1Q8CDG3 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vcpip1Q8CDG3 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC13.28□□□□□ -0.28
Vcpip1Q8CDG3 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Vcpip1Q8CDG3 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC13.28□□□□□ -0.28
Vcpip1Q8CDG3 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Vcpip1Q8CDG3 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vcpip1Q8CDG3 AC160405.1-201ENSMUST00000218207 1545 ntBASIC13.28□□□□□ -0.28
Vcpip1Q8CDG3 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vcpip1Q8CDG3 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Vcpip1Q8CDG3 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vcpip1Q8CDG3 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vcpip1Q8CDG3 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Vcpip1Q8CDG3 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Vcpip1Q8CDG3 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Vcpip1Q8CDG3 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Vcpip1Q8CDG3 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Vcpip1Q8CDG3 Gm43823-201ENSMUST00000197391 1808 ntBASIC13.27□□□□□ -0.28
Vcpip1Q8CDG3 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Vcpip1Q8CDG3 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Vcpip1Q8CDG3 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Vcpip1Q8CDG3 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Vcpip1Q8CDG3 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC13.27□□□□□ -0.28
Vcpip1Q8CDG3 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Vcpip1Q8CDG3 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Vcpip1Q8CDG3 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Vcpip1Q8CDG3 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC13.27□□□□□ -0.29
Vcpip1Q8CDG3 Gm27243-201ENSMUST00000183964 521 ntBASIC13.27□□□□□ -0.29
Vcpip1Q8CDG3 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC13.27□□□□□ -0.29
Vcpip1Q8CDG3 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
Vcpip1Q8CDG3 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Vcpip1Q8CDG3 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Vcpip1Q8CDG3 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Vcpip1Q8CDG3 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Vcpip1Q8CDG3 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Vcpip1Q8CDG3 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Vcpip1Q8CDG3 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Vcpip1Q8CDG3 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Vcpip1Q8CDG3 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Vcpip1Q8CDG3 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Vcpip1Q8CDG3 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Vcpip1Q8CDG3 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Vcpip1Q8CDG3 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Vcpip1Q8CDG3 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Vcpip1Q8CDG3 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Vcpip1Q8CDG3 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Vcpip1Q8CDG3 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Vcpip1Q8CDG3 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Vcpip1Q8CDG3 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Vcpip1Q8CDG3 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Vcpip1Q8CDG3 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Vcpip1Q8CDG3 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Vcpip1Q8CDG3 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Vcpip1Q8CDG3 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Vcpip1Q8CDG3 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vcpip1Q8CDG3 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Vcpip1Q8CDG3 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vcpip1Q8CDG3 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vcpip1Q8CDG3 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vcpip1Q8CDG3 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC13.26□□□□□ -0.29
Vcpip1Q8CDG3 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vcpip1Q8CDG3 Gm14723-201ENSMUST00000118686 215 ntBASIC13.26□□□□□ -0.29
Vcpip1Q8CDG3 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Vcpip1Q8CDG3 Rmrp-201ENSMUST00000157463 271 ntBASIC13.26□□□□□ -0.29
Vcpip1Q8CDG3 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vcpip1Q8CDG3 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC13.26□□□□□ -0.29
Vcpip1Q8CDG3 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Vcpip1Q8CDG3 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC13.26□□□□□ -0.29
Vcpip1Q8CDG3 Gm8793-201ENSMUST00000183069 1303 ntBASIC13.26□□□□□ -0.29
Vcpip1Q8CDG3 Gm27514-201ENSMUST00000183692 110 ntBASIC13.26□□□□□ -0.29
Vcpip1Q8CDG3 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms