Protein–RNA interactions for Protein: Q8CCS6

Pabpn1, Polyadenylate-binding protein 2, mousemouse

Known RBP Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pabpn1Q8CCS6 Xlr4c-204ENSMUST00000114531 1104 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
Pabpn1Q8CCS6 Osgep-207ENSMUST00000162177 1219 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Pabpn1Q8CCS6 Tex29-204ENSMUST00000166638 561 ntAPPRIS P2 TSL 5 BASIC18.75■□□□□ 0.59
Pabpn1Q8CCS6 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Pabpn1Q8CCS6 Gm7525-201ENSMUST00000219425 454 ntBASIC18.75■□□□□ 0.59
Pabpn1Q8CCS6 Gm12248-203ENSMUST00000219877 1160 ntAPPRIS P5 TSL 5 BASIC18.75■□□□□ 0.59
Pabpn1Q8CCS6 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC18.75■□□□□ 0.59
Pabpn1Q8CCS6 CT573047.1-201ENSMUST00000223652 851 ntBASIC18.75■□□□□ 0.59
Pabpn1Q8CCS6 Pgk1-rs7-201ENSMUST00000085735 1255 ntBASIC18.75■□□□□ 0.59
Pabpn1Q8CCS6 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pabpn1Q8CCS6 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Pabpn1Q8CCS6 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pabpn1Q8CCS6 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pabpn1Q8CCS6 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Pabpn1Q8CCS6 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pabpn1Q8CCS6 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pabpn1Q8CCS6 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pabpn1Q8CCS6 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pabpn1Q8CCS6 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pabpn1Q8CCS6 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pabpn1Q8CCS6 Pou3f4-201ENSMUST00000078229 2928 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Pabpn1Q8CCS6 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC18.74■□□□□ 0.59
Pabpn1Q8CCS6 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pabpn1Q8CCS6 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pabpn1Q8CCS6 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pabpn1Q8CCS6 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Pabpn1Q8CCS6 Gm43134-201ENSMUST00000199434 1886 ntBASIC18.74■□□□□ 0.59
Pabpn1Q8CCS6 Gm7701-201ENSMUST00000163185 1479 ntBASIC18.74■□□□□ 0.59
Pabpn1Q8CCS6 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Pabpn1Q8CCS6 Fam3a-204ENSMUST00000114141 1243 ntTSL 5 BASIC18.74■□□□□ 0.59
Pabpn1Q8CCS6 Gm14006-201ENSMUST00000122132 981 ntBASIC18.74■□□□□ 0.59
Pabpn1Q8CCS6 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Pabpn1Q8CCS6 4933407I05Rik-202ENSMUST00000213467 420 ntTSL 2 BASIC18.74■□□□□ 0.59
Pabpn1Q8CCS6 Myl6-203ENSMUST00000217776 562 ntTSL 3 BASIC18.74■□□□□ 0.59
Pabpn1Q8CCS6 Gm31513-201ENSMUST00000223261 684 ntTSL 2 BASIC18.74■□□□□ 0.59
Pabpn1Q8CCS6 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pabpn1Q8CCS6 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pabpn1Q8CCS6 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pabpn1Q8CCS6 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pabpn1Q8CCS6 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pabpn1Q8CCS6 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC18.74■□□□□ 0.59
Pabpn1Q8CCS6 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Pabpn1Q8CCS6 AC129931.1-201ENSMUST00000228865 1861 ntBASIC18.73■□□□□ 0.59
Pabpn1Q8CCS6 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pabpn1Q8CCS6 Gm45218-201ENSMUST00000205533 1678 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Pabpn1Q8CCS6 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pabpn1Q8CCS6 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pabpn1Q8CCS6 Gm15519-201ENSMUST00000120088 1566 ntBASIC18.73■□□□□ 0.59
Pabpn1Q8CCS6 Klhdc10-206ENSMUST00000144272 1387 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Pabpn1Q8CCS6 Gm22937-201ENSMUST00000103954 131 ntBASIC18.73■□□□□ 0.59
Pabpn1Q8CCS6 Skint7-202ENSMUST00000106568 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pabpn1Q8CCS6 Slc31a2-202ENSMUST00000107467 868 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pabpn1Q8CCS6 Tctex1d1-205ENSMUST00000140654 891 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
Pabpn1Q8CCS6 Gm25492-201ENSMUST00000157383 129 ntBASIC18.73■□□□□ 0.59
Pabpn1Q8CCS6 Gm9372-201ENSMUST00000168454 430 ntBASIC18.73■□□□□ 0.59
Pabpn1Q8CCS6 Gm28415-201ENSMUST00000187528 452 ntTSL 2 BASIC18.73■□□□□ 0.59
Pabpn1Q8CCS6 6720482G16Rik-201ENSMUST00000199552 1192 ntBASIC18.73■□□□□ 0.59
Pabpn1Q8CCS6 Gm4903-201ENSMUST00000210462 405 ntBASIC18.73■□□□□ 0.59
Pabpn1Q8CCS6 Map7-203ENSMUST00000213312 795 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Pabpn1Q8CCS6 AC170597.1-201ENSMUST00000221956 440 ntTSL 2 BASIC18.73■□□□□ 0.59
Pabpn1Q8CCS6 Rps8-ps4-201ENSMUST00000092523 612 ntBASIC18.73■□□□□ 0.59
Pabpn1Q8CCS6 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC18.73■□□□□ 0.59
Pabpn1Q8CCS6 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC18.73■□□□□ 0.59
Pabpn1Q8CCS6 D430013B06Rik-201ENSMUST00000192922 1872 ntBASIC18.73■□□□□ 0.59
Pabpn1Q8CCS6 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Pabpn1Q8CCS6 AC166361.2-201ENSMUST00000219269 1415 ntBASIC18.73■□□□□ 0.59
Pabpn1Q8CCS6 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pabpn1Q8CCS6 Snx27-208ENSMUST00000200642 1308 ntTSL 5 BASIC18.73■□□□□ 0.59
Pabpn1Q8CCS6 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pabpn1Q8CCS6 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pabpn1Q8CCS6 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC18.72■□□□□ 0.59
Pabpn1Q8CCS6 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC18.72■□□□□ 0.59
Pabpn1Q8CCS6 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pabpn1Q8CCS6 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pabpn1Q8CCS6 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pabpn1Q8CCS6 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pabpn1Q8CCS6 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Pabpn1Q8CCS6 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
Pabpn1Q8CCS6 Gm10842-201ENSMUST00000100338 369 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Pabpn1Q8CCS6 Srp14-202ENSMUST00000110862 587 ntTSL 2 BASIC18.72■□□□□ 0.59
Pabpn1Q8CCS6 Gm12705-201ENSMUST00000129460 872 ntTSL 2 BASIC18.72■□□□□ 0.59
Pabpn1Q8CCS6 Gm14616-201ENSMUST00000131690 314 ntTSL 3 BASIC18.72■□□□□ 0.59
Pabpn1Q8CCS6 Gm15540-201ENSMUST00000136052 674 ntTSL 2 BASIC18.72■□□□□ 0.59
Pabpn1Q8CCS6 Gm26626-201ENSMUST00000180989 713 ntTSL 2 BASIC18.72■□□□□ 0.59
Pabpn1Q8CCS6 Mir6359-201ENSMUST00000183668 81 ntBASIC18.72■□□□□ 0.59
Pabpn1Q8CCS6 Gm43726-201ENSMUST00000199110 775 ntBASIC18.72■□□□□ 0.59
Pabpn1Q8CCS6 1810059H22Rik-207ENSMUST00000204809 289 ntTSL 3 BASIC18.72■□□□□ 0.59
Pabpn1Q8CCS6 CT030170.2-201ENSMUST00000223267 126 ntBASIC18.72■□□□□ 0.59
Pabpn1Q8CCS6 Gm5468-202ENSMUST00000227851 682 ntBASIC18.72■□□□□ 0.59
Pabpn1Q8CCS6 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pabpn1Q8CCS6 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pabpn1Q8CCS6 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pabpn1Q8CCS6 Ccdc30-203ENSMUST00000084307 989 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Pabpn1Q8CCS6 Lrp2bp-201ENSMUST00000066451 1525 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Pabpn1Q8CCS6 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC18.72■□□□□ 0.59
Pabpn1Q8CCS6 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Pabpn1Q8CCS6 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pabpn1Q8CCS6 Rnf17-202ENSMUST00000223627 2077 ntBASIC18.72■□□□□ 0.59
Pabpn1Q8CCS6 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Pabpn1Q8CCS6 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms