Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Lysmd4Q8CC84 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Lysmd4Q8CC84 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Lysmd4Q8CC84 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Lysmd4Q8CC84 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC11.07□□□□□ -0.64
Lysmd4Q8CC84 AC164426.2-201ENSMUST00000225993 2492 ntBASIC11.07□□□□□ -0.64
Lysmd4Q8CC84 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Lysmd4Q8CC84 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Lysmd4Q8CC84 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Lysmd4Q8CC84 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC11.06□□□□□ -0.64
Lysmd4Q8CC84 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Lysmd4Q8CC84 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Lysmd4Q8CC84 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Lysmd4Q8CC84 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Lysmd4Q8CC84 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Lysmd4Q8CC84 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Lysmd4Q8CC84 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Lysmd4Q8CC84 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Lysmd4Q8CC84 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Lysmd4Q8CC84 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC11.06□□□□□ -0.64
Lysmd4Q8CC84 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Lysmd4Q8CC84 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Lysmd4Q8CC84 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Lysmd4Q8CC84 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
Lysmd4Q8CC84 Auts2-212ENSMUST00000178555 309 ntBASIC11.06□□□□□ -0.64
Lysmd4Q8CC84 Gm27701-201ENSMUST00000184498 110 ntBASIC11.06□□□□□ -0.64
Lysmd4Q8CC84 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Lysmd4Q8CC84 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC11.06□□□□□ -0.64
Lysmd4Q8CC84 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Lysmd4Q8CC84 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC11.06□□□□□ -0.64
Lysmd4Q8CC84 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Lysmd4Q8CC84 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Lysmd4Q8CC84 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Lysmd4Q8CC84 n-R5s77-201ENSMUST00000083757 119 ntBASIC11.06□□□□□ -0.64
Lysmd4Q8CC84 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Lysmd4Q8CC84 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Lysmd4Q8CC84 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC11.06□□□□□ -0.64
Lysmd4Q8CC84 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Lysmd4Q8CC84 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Lysmd4Q8CC84 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Lysmd4Q8CC84 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Lysmd4Q8CC84 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC11.06□□□□□ -0.64
Lysmd4Q8CC84 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Lysmd4Q8CC84 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Lysmd4Q8CC84 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Lysmd4Q8CC84 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Lysmd4Q8CC84 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Lysmd4Q8CC84 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Lysmd4Q8CC84 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Lysmd4Q8CC84 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Lysmd4Q8CC84 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Lysmd4Q8CC84 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC11.05□□□□□ -0.64
Lysmd4Q8CC84 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
Lysmd4Q8CC84 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Lysmd4Q8CC84 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Lysmd4Q8CC84 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC11.05□□□□□ -0.64
Lysmd4Q8CC84 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Lysmd4Q8CC84 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Lysmd4Q8CC84 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Lysmd4Q8CC84 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC11.05□□□□□ -0.64
Lysmd4Q8CC84 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Lysmd4Q8CC84 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC11.05□□□□□ -0.64
Lysmd4Q8CC84 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Lysmd4Q8CC84 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Lysmd4Q8CC84 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Lysmd4Q8CC84 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC11.05□□□□□ -0.64
Lysmd4Q8CC84 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC11.05□□□□□ -0.64
Lysmd4Q8CC84 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Lysmd4Q8CC84 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC11.05□□□□□ -0.64
Lysmd4Q8CC84 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Lysmd4Q8CC84 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC11.05□□□□□ -0.64
Lysmd4Q8CC84 Gm18018-201ENSMUST00000198273 408 ntBASIC11.05□□□□□ -0.64
Lysmd4Q8CC84 Gm38671-201ENSMUST00000200573 130 ntBASIC11.05□□□□□ -0.64
Lysmd4Q8CC84 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Lysmd4Q8CC84 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC11.05□□□□□ -0.64
Lysmd4Q8CC84 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC11.05□□□□□ -0.64
Lysmd4Q8CC84 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Lysmd4Q8CC84 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Lysmd4Q8CC84 Gm2423-201ENSMUST00000074863 733 ntBASIC11.05□□□□□ -0.64
Lysmd4Q8CC84 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC11.05□□□□□ -0.64
Lysmd4Q8CC84 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Lysmd4Q8CC84 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC11.05□□□□□ -0.64
Lysmd4Q8CC84 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Lysmd4Q8CC84 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Lysmd4Q8CC84 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
Lysmd4Q8CC84 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Lysmd4Q8CC84 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Lysmd4Q8CC84 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Lysmd4Q8CC84 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Lysmd4Q8CC84 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Lysmd4Q8CC84 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Lysmd4Q8CC84 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Lysmd4Q8CC84 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Lysmd4Q8CC84 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Lysmd4Q8CC84 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Lysmd4Q8CC84 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Lysmd4Q8CC84 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Lysmd4Q8CC84 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Lysmd4Q8CC84 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Lysmd4Q8CC84 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms