Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Trim9Q8C7M3 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC13.61□□□□□ -0.23
Trim9Q8C7M3 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim9Q8C7M3 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trim9Q8C7M3 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Trim9Q8C7M3 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC13.61□□□□□ -0.23
Trim9Q8C7M3 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim9Q8C7M3 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim9Q8C7M3 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Trim9Q8C7M3 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC13.61□□□□□ -0.23
Trim9Q8C7M3 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trim9Q8C7M3 AC154517.2-201ENSMUST00000220829 2458 ntBASIC13.61□□□□□ -0.23
Trim9Q8C7M3 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC13.6□□□□□ -0.23
Trim9Q8C7M3 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC13.6□□□□□ -0.23
Trim9Q8C7M3 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trim9Q8C7M3 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trim9Q8C7M3 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim9Q8C7M3 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trim9Q8C7M3 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim9Q8C7M3 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim9Q8C7M3 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim9Q8C7M3 Gm13722-201ENSMUST00000117964 3066 ntBASIC13.6□□□□□ -0.23
Trim9Q8C7M3 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC13.6□□□□□ -0.23
Trim9Q8C7M3 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC13.6□□□□□ -0.23
Trim9Q8C7M3 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trim9Q8C7M3 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Trim9Q8C7M3 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC13.6□□□□□ -0.23
Trim9Q8C7M3 AC113031.8-201ENSMUST00000227856 631 ntBASIC13.6□□□□□ -0.23
Trim9Q8C7M3 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim9Q8C7M3 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Trim9Q8C7M3 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim9Q8C7M3 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim9Q8C7M3 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim9Q8C7M3 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim9Q8C7M3 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC13.6□□□□□ -0.23
Trim9Q8C7M3 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim9Q8C7M3 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim9Q8C7M3 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim9Q8C7M3 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trim9Q8C7M3 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Trim9Q8C7M3 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC13.6□□□□□ -0.23
Trim9Q8C7M3 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Trim9Q8C7M3 Pck2-205ENSMUST00000226352 2784 ntBASIC13.6□□□□□ -0.23
Trim9Q8C7M3 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Trim9Q8C7M3 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim9Q8C7M3 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim9Q8C7M3 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim9Q8C7M3 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim9Q8C7M3 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trim9Q8C7M3 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trim9Q8C7M3 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim9Q8C7M3 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim9Q8C7M3 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim9Q8C7M3 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trim9Q8C7M3 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trim9Q8C7M3 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim9Q8C7M3 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC13.59□□□□□ -0.23
Trim9Q8C7M3 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
Trim9Q8C7M3 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim9Q8C7M3 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC13.59□□□□□ -0.23
Trim9Q8C7M3 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trim9Q8C7M3 Gm42693-201ENSMUST00000196779 631 ntBASIC13.59□□□□□ -0.23
Trim9Q8C7M3 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trim9Q8C7M3 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC13.59□□□□□ -0.23
Trim9Q8C7M3 AC132384.14-201ENSMUST00000219346 1147 ntBASIC13.59□□□□□ -0.23
Trim9Q8C7M3 AC122840.1-201ENSMUST00000220915 3334 ntBASIC13.59□□□□□ -0.23
Trim9Q8C7M3 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim9Q8C7M3 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim9Q8C7M3 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim9Q8C7M3 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC13.59□□□□□ -0.23
Trim9Q8C7M3 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Trim9Q8C7M3 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Trim9Q8C7M3 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
Trim9Q8C7M3 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim9Q8C7M3 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim9Q8C7M3 CT025624.1-201ENSMUST00000224007 2700 ntBASIC13.59□□□□□ -0.23
Trim9Q8C7M3 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trim9Q8C7M3 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim9Q8C7M3 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim9Q8C7M3 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trim9Q8C7M3 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim9Q8C7M3 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC13.59□□□□□ -0.23
Trim9Q8C7M3 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trim9Q8C7M3 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim9Q8C7M3 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trim9Q8C7M3 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Trim9Q8C7M3 Gm19817-201ENSMUST00000199764 2132 ntBASIC13.58□□□□□ -0.23
Trim9Q8C7M3 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC13.58□□□□□ -0.23
Trim9Q8C7M3 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC13.58□□□□□ -0.23
Trim9Q8C7M3 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC13.58□□□□□ -0.24
Trim9Q8C7M3 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trim9Q8C7M3 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim9Q8C7M3 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim9Q8C7M3 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim9Q8C7M3 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim9Q8C7M3 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim9Q8C7M3 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trim9Q8C7M3 Gm18935-201ENSMUST00000212692 664 ntBASIC13.58□□□□□ -0.24
Trim9Q8C7M3 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim9Q8C7M3 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 105.9 ms