Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ccdc60Q8C4J0 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ccdc60Q8C4J0 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ccdc60Q8C4J0 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Ccdc60Q8C4J0 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Ccdc60Q8C4J0 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ccdc60Q8C4J0 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ccdc60Q8C4J0 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ccdc60Q8C4J0 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC15.73■□□□□ 0.11
Ccdc60Q8C4J0 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ccdc60Q8C4J0 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC15.73■□□□□ 0.11
Ccdc60Q8C4J0 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ccdc60Q8C4J0 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC15.73■□□□□ 0.11
Ccdc60Q8C4J0 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Ccdc60Q8C4J0 AC166344.1-202ENSMUST00000224139 234 ntBASIC15.73■□□□□ 0.11
Ccdc60Q8C4J0 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ccdc60Q8C4J0 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Ccdc60Q8C4J0 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ccdc60Q8C4J0 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Ccdc60Q8C4J0 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ccdc60Q8C4J0 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Ccdc60Q8C4J0 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ccdc60Q8C4J0 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Ccdc60Q8C4J0 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ccdc60Q8C4J0 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC15.73■□□□□ 0.11
Ccdc60Q8C4J0 Gm9361-201ENSMUST00000198695 1507 ntBASIC15.73■□□□□ 0.11
Ccdc60Q8C4J0 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ccdc60Q8C4J0 Gm5053-201ENSMUST00000208361 1678 ntBASIC15.73■□□□□ 0.11
Ccdc60Q8C4J0 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ccdc60Q8C4J0 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ccdc60Q8C4J0 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Ccdc60Q8C4J0 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Ccdc60Q8C4J0 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ccdc60Q8C4J0 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Ccdc60Q8C4J0 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ccdc60Q8C4J0 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ccdc60Q8C4J0 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ccdc60Q8C4J0 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Ccdc60Q8C4J0 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC15.72■□□□□ 0.11
Ccdc60Q8C4J0 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Ccdc60Q8C4J0 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC15.72■□□□□ 0.11
Ccdc60Q8C4J0 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Ccdc60Q8C4J0 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Ccdc60Q8C4J0 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC15.72■□□□□ 0.11
Ccdc60Q8C4J0 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Ccdc60Q8C4J0 Gm8885-201ENSMUST00000189382 598 ntBASIC15.72■□□□□ 0.11
Ccdc60Q8C4J0 Ighv1-62-201ENSMUST00000193406 350 ntBASIC15.72■□□□□ 0.11
Ccdc60Q8C4J0 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Ccdc60Q8C4J0 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ccdc60Q8C4J0 Gm10312-201ENSMUST00000078515 489 ntBASIC15.72■□□□□ 0.11
Ccdc60Q8C4J0 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Ccdc60Q8C4J0 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Ccdc60Q8C4J0 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Ccdc60Q8C4J0 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ccdc60Q8C4J0 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ccdc60Q8C4J0 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Ccdc60Q8C4J0 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Ccdc60Q8C4J0 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ccdc60Q8C4J0 Gm20554-201ENSMUST00000177421 2352 ntBASIC15.71■□□□□ 0.11
Ccdc60Q8C4J0 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ccdc60Q8C4J0 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ccdc60Q8C4J0 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC15.71■□□□□ 0.11
Ccdc60Q8C4J0 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Ccdc60Q8C4J0 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Ccdc60Q8C4J0 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ccdc60Q8C4J0 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Ccdc60Q8C4J0 Gm24830-201ENSMUST00000102024 166 ntBASIC15.71■□□□□ 0.11
Ccdc60Q8C4J0 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Ccdc60Q8C4J0 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Ccdc60Q8C4J0 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC15.71■□□□□ 0.11
Ccdc60Q8C4J0 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ccdc60Q8C4J0 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Ccdc60Q8C4J0 Gm20482-202ENSMUST00000174729 825 ntBASIC15.71■□□□□ 0.11
Ccdc60Q8C4J0 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC15.71■□□□□ 0.11
Ccdc60Q8C4J0 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC15.71■□□□□ 0.11
Ccdc60Q8C4J0 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC15.71■□□□□ 0.11
Ccdc60Q8C4J0 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ccdc60Q8C4J0 Gm9996-201ENSMUST00000070359 913 ntBASIC15.71■□□□□ 0.11
Ccdc60Q8C4J0 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Ccdc60Q8C4J0 Gm26232-201ENSMUST00000083360 166 ntBASIC15.71■□□□□ 0.11
Ccdc60Q8C4J0 Rnu1b6-201ENSMUST00000083839 166 ntBASIC15.71■□□□□ 0.11
Ccdc60Q8C4J0 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Ccdc60Q8C4J0 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ccdc60Q8C4J0 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ccdc60Q8C4J0 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ccdc60Q8C4J0 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
Ccdc60Q8C4J0 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ccdc60Q8C4J0 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ccdc60Q8C4J0 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ccdc60Q8C4J0 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ccdc60Q8C4J0 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Ccdc60Q8C4J0 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC15.71■□□□□ 0.1
Ccdc60Q8C4J0 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC15.71■□□□□ 0.1
Ccdc60Q8C4J0 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.1
Ccdc60Q8C4J0 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ccdc60Q8C4J0 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ccdc60Q8C4J0 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ccdc60Q8C4J0 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Ccdc60Q8C4J0 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ccdc60Q8C4J0 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms