Protein–RNA interactions for Protein: Q8BWU1

Sprn, Shadow of prion protein, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SprnQ8BWU1 AC211878.3-201ENSMUST00000222629 2018 ntBASIC10.89□□□□□ -0.67
SprnQ8BWU1 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
SprnQ8BWU1 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
SprnQ8BWU1 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
SprnQ8BWU1 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
SprnQ8BWU1 AC138329.2-201ENSMUST00000225579 1842 ntBASIC10.89□□□□□ -0.67
SprnQ8BWU1 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
SprnQ8BWU1 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
SprnQ8BWU1 Gm43963-201ENSMUST00000203466 2488 ntBASIC10.89□□□□□ -0.67
SprnQ8BWU1 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
SprnQ8BWU1 Gm12957-201ENSMUST00000117835 377 ntBASIC10.89□□□□□ -0.67
SprnQ8BWU1 Gm11814-201ENSMUST00000119515 929 ntBASIC10.89□□□□□ -0.67
SprnQ8BWU1 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
SprnQ8BWU1 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
SprnQ8BWU1 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
SprnQ8BWU1 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC10.89□□□□□ -0.67
SprnQ8BWU1 Gm27331-201ENSMUST00000183705 60 ntBASIC10.89□□□□□ -0.67
SprnQ8BWU1 Gm27847-201ENSMUST00000183711 107 ntBASIC10.89□□□□□ -0.67
SprnQ8BWU1 Gm27375-201ENSMUST00000183799 107 ntBASIC10.89□□□□□ -0.67
SprnQ8BWU1 Gm27243-201ENSMUST00000183964 521 ntBASIC10.89□□□□□ -0.67
SprnQ8BWU1 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC10.89□□□□□ -0.67
SprnQ8BWU1 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
SprnQ8BWU1 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
SprnQ8BWU1 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
SprnQ8BWU1 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC10.89□□□□□ -0.67
SprnQ8BWU1 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC10.89□□□□□ -0.67
SprnQ8BWU1 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC10.89□□□□□ -0.67
SprnQ8BWU1 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
SprnQ8BWU1 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
SprnQ8BWU1 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
SprnQ8BWU1 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
SprnQ8BWU1 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
SprnQ8BWU1 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
SprnQ8BWU1 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
SprnQ8BWU1 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
SprnQ8BWU1 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC10.89□□□□□ -0.67
SprnQ8BWU1 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
SprnQ8BWU1 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC10.89□□□□□ -0.67
SprnQ8BWU1 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
SprnQ8BWU1 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
SprnQ8BWU1 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC10.89□□□□□ -0.67
SprnQ8BWU1 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
SprnQ8BWU1 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
SprnQ8BWU1 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
SprnQ8BWU1 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
SprnQ8BWU1 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
SprnQ8BWU1 Gm36957-201ENSMUST00000192982 2824 ntBASIC10.89□□□□□ -0.67
SprnQ8BWU1 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
SprnQ8BWU1 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC10.89□□□□□ -0.67
SprnQ8BWU1 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
SprnQ8BWU1 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
SprnQ8BWU1 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC10.89□□□□□ -0.67
SprnQ8BWU1 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
SprnQ8BWU1 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
SprnQ8BWU1 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
SprnQ8BWU1 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
SprnQ8BWU1 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
SprnQ8BWU1 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
SprnQ8BWU1 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC10.88□□□□□ -0.67
SprnQ8BWU1 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
SprnQ8BWU1 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
SprnQ8BWU1 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
SprnQ8BWU1 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
SprnQ8BWU1 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
SprnQ8BWU1 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
SprnQ8BWU1 Gm11618-201ENSMUST00000117946 267 ntBASIC10.88□□□□□ -0.67
SprnQ8BWU1 Gm11964-201ENSMUST00000120982 444 ntBASIC10.88□□□□□ -0.67
SprnQ8BWU1 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
SprnQ8BWU1 Gm23119-201ENSMUST00000158610 140 ntBASIC10.88□□□□□ -0.67
SprnQ8BWU1 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
SprnQ8BWU1 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
SprnQ8BWU1 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC10.88□□□□□ -0.67
SprnQ8BWU1 Gm37042-201ENSMUST00000193816 581 ntBASIC10.88□□□□□ -0.67
SprnQ8BWU1 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
SprnQ8BWU1 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC10.88□□□□□ -0.67
SprnQ8BWU1 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
SprnQ8BWU1 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
SprnQ8BWU1 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
SprnQ8BWU1 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
SprnQ8BWU1 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
SprnQ8BWU1 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
SprnQ8BWU1 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
SprnQ8BWU1 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC10.88□□□□□ -0.67
SprnQ8BWU1 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
SprnQ8BWU1 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
SprnQ8BWU1 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
SprnQ8BWU1 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
SprnQ8BWU1 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
SprnQ8BWU1 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
SprnQ8BWU1 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
SprnQ8BWU1 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
SprnQ8BWU1 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC10.88□□□□□ -0.67
SprnQ8BWU1 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
SprnQ8BWU1 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
SprnQ8BWU1 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
SprnQ8BWU1 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
SprnQ8BWU1 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
SprnQ8BWU1 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
SprnQ8BWU1 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC10.88□□□□□ -0.67
SprnQ8BWU1 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms